Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SRP9P49458 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP9P49458 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 AC125634.1-201ENST00000438758 1403 ntBASIC15.1■□□□□ 0.01
SRP9P49458 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP9P49458 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 LYSMD4-203ENST00000378904 2122 ntBASIC15.1■□□□□ 0.01
SRP9P49458 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 AC092053.1-201ENST00000605787 1936 ntBASIC15.1■□□□□ 0.01
SRP9P49458 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRP9P49458 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP9P49458 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP9P49458 AC096633.1-201ENST00000422446 749 ntBASIC15.1■□□□□ 0.01
SRP9P49458 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.1■□□□□ 0.01
SRP9P49458 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.1■□□□□ 0.01
SRP9P49458 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.1■□□□□ 0.01
SRP9P49458 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.1■□□□□ 0.01
SRP9P49458 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.1■□□□□ 0.01
SRP9P49458 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP9P49458 NSUN5P1-202ENST00000421140 1535 ntBASIC15.1■□□□□ 0.01
SRP9P49458 NSUN5P2-203ENST00000457352 1529 ntBASIC15.1■□□□□ 0.01
SRP9P49458 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP9P49458 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP9P49458 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP9P49458 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRP9P49458 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SRP9P49458 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.09■□□□□ 0.01
SRP9P49458 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SRP9P49458 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.09■□□□□ 0.01
SRP9P49458 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 POM121L3P-201ENST00000419331 1163 ntBASIC15.09■□□□□ 0.01
SRP9P49458 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
SRP9P49458 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SRP9P49458 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.09■□□□□ 0.01
SRP9P49458 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.09■□□□□ 0.01
SRP9P49458 AC005336.2-201ENST00000593183 939 ntBASIC15.09■□□□□ 0.01
SRP9P49458 AL138831.2-201ENST00000606564 490 ntBASIC15.09■□□□□ 0.01
SRP9P49458 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SRP9P49458 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SRP9P49458 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.09■□□□□ 0.01
SRP9P49458 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 AC024909.3-201ENST00000611513 2257 ntBASIC15.09■□□□□ 0.01
SRP9P49458 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP9P49458 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP9P49458 AC092364.2-201ENST00000596710 2692 ntBASIC15.09■□□□□ 0.01
SRP9P49458 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.08■□□□□ 0.01
SRP9P49458 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.08■□□□□ 0.01
SRP9P49458 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SRP9P49458 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SRP9P49458 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SRP9P49458 BX276092.7-203ENST00000637198 1536 ntBASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms