Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 TUBB8P12-201ENST00000308911 1335 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 TUBB7P-202ENST00000428444 1305 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 TUBB8P7-204ENST00000567960 1332 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 ECEL1P2-202ENST00000465689 757 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 AC068472.1-201ENST00000474589 881 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.93□□□□□ -0.18
NKX2-1P43699 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 AL355075.4-201ENST00000554988 638 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.93□□□□□ -0.18
NKX2-1P43699 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 AC019129.2-201ENST00000609837 1235 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-1P43699 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-1P43699 GPR89P-201ENST00000407924 1495 ntBASIC13.93□□□□□ -0.18
NKX2-1P43699 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NKX2-1P43699 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-1P43699 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-1P43699 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX2-1P43699 AC006538.1-201ENST00000567905 1585 ntBASIC13.92□□□□□ -0.18
NKX2-1P43699 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-1P43699 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-1P43699 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 AL645728.1-201ENST00000366221 2101 ntBASIC13.92□□□□□ -0.18
NKX2-1P43699 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-1P43699 HMGA1P5-201ENST00000412453 271 ntBASIC13.92□□□□□ -0.18
NKX2-1P43699 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-1P43699 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX2-1P43699 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-1P43699 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NKX2-1P43699 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NKX2-1P43699 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-1P43699 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-1P43699 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NKX2-1P43699 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms