Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.26■□□□□ 0.67
CNGA1P29973 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CNGA1P29973 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.26■□□□□ 0.67
CNGA1P29973 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CNGA1P29973 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.26■□□□□ 0.67
CNGA1P29973 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNGA1P29973 AKAP8P1-201ENST00000434743 1349 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.25■□□□□ 0.67
CNGA1P29973 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.25■□□□□ 0.67
CNGA1P29973 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.25■□□□□ 0.67
CNGA1P29973 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.25■□□□□ 0.67
CNGA1P29973 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNGA1P29973 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CNGA1P29973 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.25■□□□□ 0.67
CNGA1P29973 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CNGA1P29973 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 MIR661-201ENST00000384842 89 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNGA1P29973 GPS2P2-201ENST00000430745 888 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.25■□□□□ 0.67
CNGA1P29973 SPCS2P4-201ENST00000436160 681 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 AC005225.4-201ENST00000557330 545 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 MIR4515-201ENST00000584082 81 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 AL161645.1-201ENST00000622716 1255 ntBASIC19.25■□□□□ 0.67
CNGA1P29973 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CNGA1P29973 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
CNGA1P29973 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
CNGA1P29973 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNGA1P29973 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.25■□□□□ 0.67
CNGA1P29973 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNGA1P29973 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 AC008677.1-201ENST00000519230 1561 ntBASIC19.24■□□□□ 0.67
CNGA1P29973 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.24■□□□□ 0.67
CNGA1P29973 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 AC107918.2-201ENST00000530817 355 ntBASIC19.24■□□□□ 0.67
CNGA1P29973 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.24■□□□□ 0.67
CNGA1P29973 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 LINC02560-201ENST00000596379 459 ntBASIC19.24■□□□□ 0.67
CNGA1P29973 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CNGA1P29973 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNGA1P29973 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNGA1P29973 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.24■□□□□ 0.67
CNGA1P29973 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.23■□□□□ 0.67
CNGA1P29973 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CNGA1P29973 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.23■□□□□ 0.67
CNGA1P29973 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.23■□□□□ 0.67
CNGA1P29973 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.23■□□□□ 0.67
CNGA1P29973 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.23■□□□□ 0.67
CNGA1P29973 AC140878.1-201ENST00000565277 250 ntBASIC19.23■□□□□ 0.67
CNGA1P29973 LINC00896-202ENST00000609602 2128 ntBASIC19.23■□□□□ 0.67
CNGA1P29973 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.23■□□□□ 0.67
CNGA1P29973 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms