Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGN1P05114 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGN1P05114 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMGN1P05114 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGN1P05114 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HMGN1P05114 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HMGN1P05114 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.39■□□□□ 0.05
HMGN1P05114 KRT18P57-201ENST00000443599 1254 ntBASIC15.39■□□□□ 0.05
HMGN1P05114 AL671277.2-201ENST00000458060 996 ntBASIC15.39■□□□□ 0.05
HMGN1P05114 HLA-J-202ENST00000469281 1241 ntBASIC15.39■□□□□ 0.05
HMGN1P05114 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.39■□□□□ 0.05
HMGN1P05114 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.39■□□□□ 0.05
HMGN1P05114 KRT8P26-201ENST00000534154 1276 ntBASIC15.39■□□□□ 0.05
HMGN1P05114 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.39■□□□□ 0.05
HMGN1P05114 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGN1P05114 LINC01238-205ENST00000567549 1107 ntBASIC15.39■□□□□ 0.05
HMGN1P05114 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 AC011498.5-201ENST00000592027 486 ntBASIC15.39■□□□□ 0.05
HMGN1P05114 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.39■□□□□ 0.05
HMGN1P05114 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HMGN1P05114 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGN1P05114 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HMGN1P05114 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.38■□□□□ 0.05
HMGN1P05114 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HMGN1P05114 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 ACTG1P4-201ENST00000425123 1122 ntBASIC15.38■□□□□ 0.05
HMGN1P05114 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.38■□□□□ 0.05
HMGN1P05114 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 AC063952.2-201ENST00000498792 1227 ntBASIC15.38■□□□□ 0.05
HMGN1P05114 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.38■□□□□ 0.05
HMGN1P05114 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HMGN1P05114 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HMGN1P05114 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.38■□□□□ 0.05
HMGN1P05114 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HMGN1P05114 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGN1P05114 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGN1P05114 AL662844.4-201ENST00000606367 2838 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms