Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBFD1O14562 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBFD1O14562 AL162727.3-201ENST00000635661 2787 ntBASIC16.47■□□□□ 0.23
UBFD1O14562 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBFD1O14562 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBFD1O14562 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.47■□□□□ 0.23
UBFD1O14562 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBFD1O14562 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
UBFD1O14562 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBFD1O14562 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBFD1O14562 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBFD1O14562 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.46■□□□□ 0.23
UBFD1O14562 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.46■□□□□ 0.23
UBFD1O14562 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
UBFD1O14562 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
UBFD1O14562 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.46■□□□□ 0.23
UBFD1O14562 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBFD1O14562 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBFD1O14562 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBFD1O14562 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBFD1O14562 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.46■□□□□ 0.23
UBFD1O14562 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.46■□□□□ 0.23
UBFD1O14562 HLA-J-202ENST00000469281 1241 ntBASIC16.46■□□□□ 0.23
UBFD1O14562 BX005266.1-201ENST00000473402 457 ntBASIC16.46■□□□□ 0.23
UBFD1O14562 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.46■□□□□ 0.23
UBFD1O14562 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.46■□□□□ 0.23
UBFD1O14562 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.46■□□□□ 0.23
UBFD1O14562 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBFD1O14562 AC069148.1-201ENST00000608741 768 ntBASIC16.46■□□□□ 0.23
UBFD1O14562 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBFD1O14562 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.46■□□□□ 0.23
UBFD1O14562 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBFD1O14562 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.46■□□□□ 0.23
UBFD1O14562 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.46■□□□□ 0.23
UBFD1O14562 AC007950.2-201ENST00000615045 2347 ntBASIC16.46■□□□□ 0.23
UBFD1O14562 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
UBFD1O14562 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBFD1O14562 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.46■□□□□ 0.22
UBFD1O14562 AC006277.1-201ENST00000624348 1610 ntBASIC16.45■□□□□ 0.22
UBFD1O14562 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBFD1O14562 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UBFD1O14562 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.45■□□□□ 0.22
UBFD1O14562 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 PRYP5-201ENST00000451909 266 ntBASIC16.45■□□□□ 0.22
UBFD1O14562 AC132008.2-207ENST00000454517 770 ntBASIC16.45■□□□□ 0.22
UBFD1O14562 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.45■□□□□ 0.22
UBFD1O14562 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.45■□□□□ 0.22
UBFD1O14562 AL591684.3-201ENST00000605187 298 ntBASIC16.45■□□□□ 0.22
UBFD1O14562 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.45■□□□□ 0.22
UBFD1O14562 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.45■□□□□ 0.22
UBFD1O14562 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.45■□□□□ 0.22
UBFD1O14562 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.45■□□□□ 0.22
UBFD1O14562 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBFD1O14562 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBFD1O14562 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 AC132872.4-202ENST00000622924 2756 ntBASIC16.44■□□□□ 0.22
UBFD1O14562 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.44■□□□□ 0.22
UBFD1O14562 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UBFD1O14562 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
UBFD1O14562 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBFD1O14562 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UBFD1O14562 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.44■□□□□ 0.22
UBFD1O14562 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.44■□□□□ 0.22
UBFD1O14562 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.44■□□□□ 0.22
UBFD1O14562 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.44■□□□□ 0.22
UBFD1O14562 AC013467.2-201ENST00000605472 835 ntBASIC16.44■□□□□ 0.22
UBFD1O14562 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UBFD1O14562 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
UBFD1O14562 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.44■□□□□ 0.22
UBFD1O14562 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms