Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA9Q9Y5H5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA9Q9Y5H5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA9Q9Y5H5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA9Q9Y5H5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA9Q9Y5H5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA9Q9Y5H5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA9Q9Y5H5 AL157400.5-201ENST00000507624 621 ntBASIC23.09■■□□□ 1.29
PCDHA9Q9Y5H5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA9Q9Y5H5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA9Q9Y5H5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
PCDHA9Q9Y5H5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA9Q9Y5H5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA9Q9Y5H5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA9Q9Y5H5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHA9Q9Y5H5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA9Q9Y5H5 AC022211.4-201ENST00000625094 2161 ntBASIC23.07■■□□□ 1.28
PCDHA9Q9Y5H5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 AC022413.1-201ENST00000624602 984 ntBASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 AC138932.3-201ENST00000567634 1902 ntBASIC23.06■■□□□ 1.28
PCDHA9Q9Y5H5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA9Q9Y5H5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA9Q9Y5H5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.05■■□□□ 1.28
PCDHA9Q9Y5H5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHA9Q9Y5H5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHA9Q9Y5H5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA9Q9Y5H5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 AC092296.2-201ENST00000589470 999 ntBASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 AL139125.2-201ENST00000623134 1869 ntBASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHA9Q9Y5H5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHA9Q9Y5H5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
PCDHA9Q9Y5H5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA9Q9Y5H5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA9Q9Y5H5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHA9Q9Y5H5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 AC025884.2-201ENST00000553429 711 ntBASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHA9Q9Y5H5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA9Q9Y5H5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA9Q9Y5H5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA9Q9Y5H5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA9Q9Y5H5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA9Q9Y5H5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA9Q9Y5H5 AC096887.2-201ENST00000623443 1957 ntBASIC22.98■■□□□ 1.27
PCDHA9Q9Y5H5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA9Q9Y5H5 ECEL1P2-201ENST00000461596 1295 ntBASIC22.98■■□□□ 1.27
PCDHA9Q9Y5H5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA9Q9Y5H5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDHA9Q9Y5H5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHA9Q9Y5H5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PCDHA9Q9Y5H5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PCDHA9Q9Y5H5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHA9Q9Y5H5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHA9Q9Y5H5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PCDHA9Q9Y5H5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.97■■□□□ 1.27
PCDHA9Q9Y5H5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA9Q9Y5H5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms