Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00588Q9Y4M8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00588Q9Y4M8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.54■□□□□ 0.24
LINC00588Q9Y4M8 AC103834.1-201ENST00000520383 144 ntBASIC16.54■□□□□ 0.24
LINC00588Q9Y4M8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00588Q9Y4M8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00588Q9Y4M8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LINC00588Q9Y4M8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00588Q9Y4M8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00588Q9Y4M8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LINC00588Q9Y4M8 MIR4508-201ENST00000584178 70 ntBASIC16.52■□□□□ 0.24
LINC00588Q9Y4M8 AC019171.1-201ENST00000601251 1056 ntBASIC16.52■□□□□ 0.24
LINC00588Q9Y4M8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
LINC00588Q9Y4M8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.52■□□□□ 0.23
LINC00588Q9Y4M8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LINC00588Q9Y4M8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 LONRF2P2-201ENST00000439212 571 ntBASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 AL451085.2-201ENST00000605085 799 ntBASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LINC00588Q9Y4M8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00588Q9Y4M8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00588Q9Y4M8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LINC00588Q9Y4M8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 AL035685.1-201ENST00000636663 812 ntBASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00588Q9Y4M8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00588Q9Y4M8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.46■□□□□ 0.23
LINC00588Q9Y4M8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00588Q9Y4M8 AC103724.3-201ENST00000564481 992 ntBASIC16.46■□□□□ 0.23
LINC00588Q9Y4M8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00588Q9Y4M8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.46■□□□□ 0.22
LINC00588Q9Y4M8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00588Q9Y4M8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00588Q9Y4M8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00588Q9Y4M8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
LINC00588Q9Y4M8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00588Q9Y4M8 AL031848.2-201ENST00000607670 837 ntBASIC16.44■□□□□ 0.22
LINC00588Q9Y4M8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00588Q9Y4M8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00588Q9Y4M8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
LINC00588Q9Y4M8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms