Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB1BQ9H0U4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB1BQ9H0U4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 AL031848.2-201ENST00000607670 837 ntBASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB1BQ9H0U4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB1BQ9H0U4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.37■□□□□ 0.85
RAB1BQ9H0U4 AC022616.5-201ENST00000518796 181 ntBASIC20.37■□□□□ 0.85
RAB1BQ9H0U4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.37■□□□□ 0.85
RAB1BQ9H0U4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB1BQ9H0U4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB1BQ9H0U4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.36■□□□□ 0.85
RAB1BQ9H0U4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB1BQ9H0U4 AC009299.2-201ENST00000482477 511 ntBASIC20.36■□□□□ 0.85
RAB1BQ9H0U4 AC103724.3-201ENST00000564481 992 ntBASIC20.36■□□□□ 0.85
RAB1BQ9H0U4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.36■□□□□ 0.85
RAB1BQ9H0U4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB1BQ9H0U4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB1BQ9H0U4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
RAB1BQ9H0U4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB1BQ9H0U4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RAB1BQ9H0U4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RAB1BQ9H0U4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB1BQ9H0U4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB1BQ9H0U4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB1BQ9H0U4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB1BQ9H0U4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB1BQ9H0U4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB1BQ9H0U4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.32■□□□□ 0.84
RAB1BQ9H0U4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RAB1BQ9H0U4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB1BQ9H0U4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB1BQ9H0U4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RAB1BQ9H0U4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RAB1BQ9H0U4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB1BQ9H0U4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.3■□□□□ 0.84
RAB1BQ9H0U4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB1BQ9H0U4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB1BQ9H0U4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB1BQ9H0U4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB1BQ9H0U4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB1BQ9H0U4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB1BQ9H0U4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB1BQ9H0U4 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB1BQ9H0U4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB1BQ9H0U4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB1BQ9H0U4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB1BQ9H0U4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB1BQ9H0U4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB1BQ9H0U4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB1BQ9H0U4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.26■□□□□ 0.83
RAB1BQ9H0U4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB1BQ9H0U4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RAB1BQ9H0U4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms