Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SDHCQ99643 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.89■□□□□ 0.94
SDHCQ99643 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDHCQ99643 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDHCQ99643 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDHCQ99643 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SDHCQ99643 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.88■□□□□ 0.93
SDHCQ99643 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHCQ99643 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.88■□□□□ 0.93
SDHCQ99643 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHCQ99643 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDHCQ99643 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHCQ99643 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
SDHCQ99643 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SDHCQ99643 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.87■□□□□ 0.93
SDHCQ99643 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SDHCQ99643 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.87■□□□□ 0.93
SDHCQ99643 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDHCQ99643 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SDHCQ99643 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SDHCQ99643 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.86■□□□□ 0.93
SDHCQ99643 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
SDHCQ99643 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.86■□□□□ 0.93
SDHCQ99643 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SDHCQ99643 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SDHCQ99643 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.86■□□□□ 0.93
SDHCQ99643 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.86■□□□□ 0.93
SDHCQ99643 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.85■□□□□ 0.93
SDHCQ99643 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.85■□□□□ 0.93
SDHCQ99643 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDHCQ99643 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDHCQ99643 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDHCQ99643 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.84■□□□□ 0.93
SDHCQ99643 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDHCQ99643 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SDHCQ99643 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDHCQ99643 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDHCQ99643 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDHCQ99643 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SDHCQ99643 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SDHCQ99643 AL117328.2-201ENST00000624617 1940 ntBASIC20.83■□□□□ 0.93
SDHCQ99643 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SDHCQ99643 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SDHCQ99643 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SDHCQ99643 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SDHCQ99643 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDHCQ99643 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDHCQ99643 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHCQ99643 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHCQ99643 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDHCQ99643 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.82■□□□□ 0.92
SDHCQ99643 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHCQ99643 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHCQ99643 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHCQ99643 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SDHCQ99643 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHCQ99643 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHCQ99643 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SDHCQ99643 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHCQ99643 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SDHCQ99643 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SDHCQ99643 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SDHCQ99643 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SDHCQ99643 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SDHCQ99643 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHCQ99643 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHCQ99643 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHCQ99643 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.78■□□□□ 0.92
SDHCQ99643 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHCQ99643 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
SDHCQ99643 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHCQ99643 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDHCQ99643 LINC00565-201ENST00000562710 2331 ntBASIC20.78■□□□□ 0.92
SDHCQ99643 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.78■□□□□ 0.92
SDHCQ99643 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.77■□□□□ 0.92
SDHCQ99643 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.77■□□□□ 0.92
SDHCQ99643 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SDHCQ99643 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHCQ99643 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SDHCQ99643 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.77■□□□□ 0.91
SDHCQ99643 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SDHCQ99643 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.77■□□□□ 0.91
SDHCQ99643 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
SDHCQ99643 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.76■□□□□ 0.91
SDHCQ99643 AC141586.4-201ENST00000624558 1573 ntBASIC20.76■□□□□ 0.91
SDHCQ99643 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHCQ99643 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SDHCQ99643 AL024507.2-201ENST00000606070 2574 ntBASIC20.76■□□□□ 0.91
SDHCQ99643 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SDHCQ99643 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.76■□□□□ 0.91
SDHCQ99643 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.76■□□□□ 0.91
SDHCQ99643 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHCQ99643 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SDHCQ99643 ABCB10P4-201ENST00000566803 2184 ntBASIC20.76■□□□□ 0.91
SDHCQ99643 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHCQ99643 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.76■□□□□ 0.91
SDHCQ99643 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.76■□□□□ 0.91
SDHCQ99643 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHCQ99643 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.76■□□□□ 0.91
SDHCQ99643 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms