Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PHACTR3Q96KR7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PHACTR3Q96KR7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.85■■■□□ 2.69
PHACTR3Q96KR7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.85■■■□□ 2.69
PHACTR3Q96KR7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PHACTR3Q96KR7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PHACTR3Q96KR7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.85■■■□□ 2.69
PHACTR3Q96KR7 KRT8P33-201ENST00000508125 1423 ntBASIC31.84■■■□□ 2.69
PHACTR3Q96KR7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
PHACTR3Q96KR7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.84■■■□□ 2.69
PHACTR3Q96KR7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PHACTR3Q96KR7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PHACTR3Q96KR7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PHACTR3Q96KR7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
PHACTR3Q96KR7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.81■■■□□ 2.68
PHACTR3Q96KR7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PHACTR3Q96KR7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PHACTR3Q96KR7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.81■■■□□ 2.68
PHACTR3Q96KR7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PHACTR3Q96KR7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.8■■■□□ 2.68
PHACTR3Q96KR7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PHACTR3Q96KR7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.8■■■□□ 2.68
PHACTR3Q96KR7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PHACTR3Q96KR7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PHACTR3Q96KR7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.79■■■□□ 2.68
PHACTR3Q96KR7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PHACTR3Q96KR7 LONRF2P2-201ENST00000439212 571 ntBASIC31.78■■■□□ 2.68
PHACTR3Q96KR7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PHACTR3Q96KR7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.78■■■□□ 2.68
PHACTR3Q96KR7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PHACTR3Q96KR7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
PHACTR3Q96KR7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
PHACTR3Q96KR7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
PHACTR3Q96KR7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.77■■■□□ 2.68
PHACTR3Q96KR7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PHACTR3Q96KR7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
PHACTR3Q96KR7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
PHACTR3Q96KR7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PHACTR3Q96KR7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PHACTR3Q96KR7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PHACTR3Q96KR7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PHACTR3Q96KR7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PHACTR3Q96KR7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.74■■■□□ 2.67
PHACTR3Q96KR7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
PHACTR3Q96KR7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PHACTR3Q96KR7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.73■■■□□ 2.67
PHACTR3Q96KR7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PHACTR3Q96KR7 AL451085.2-201ENST00000605085 799 ntBASIC31.73■■■□□ 2.67
PHACTR3Q96KR7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PHACTR3Q96KR7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 AC019171.1-201ENST00000601251 1056 ntBASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PHACTR3Q96KR7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
PHACTR3Q96KR7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.71■■■□□ 2.67
PHACTR3Q96KR7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
PHACTR3Q96KR7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PHACTR3Q96KR7 MIR4508-201ENST00000584178 70 ntBASIC31.71■■■□□ 2.67
PHACTR3Q96KR7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.71■■■□□ 2.67
PHACTR3Q96KR7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.71■■■□□ 2.67
PHACTR3Q96KR7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
PHACTR3Q96KR7 ERN1-208ENST00000606895 2068 ntBASIC31.69■■■□□ 2.66
PHACTR3Q96KR7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
PHACTR3Q96KR7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PHACTR3Q96KR7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.69■■■□□ 2.66
PHACTR3Q96KR7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PHACTR3Q96KR7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PHACTR3Q96KR7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.68■■■□□ 2.66
PHACTR3Q96KR7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
PHACTR3Q96KR7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PHACTR3Q96KR7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
PHACTR3Q96KR7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.67■■■□□ 2.66
PHACTR3Q96KR7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PHACTR3Q96KR7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PHACTR3Q96KR7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PHACTR3Q96KR7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.66■■■□□ 2.66
PHACTR3Q96KR7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.66■■■□□ 2.66
PHACTR3Q96KR7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 AC103724.3-201ENST00000564481 992 ntBASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.65■■■□□ 2.66
PHACTR3Q96KR7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
PHACTR3Q96KR7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.64■■■□□ 2.66
PHACTR3Q96KR7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms