Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE4Q96A23 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE4Q96A23 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE4Q96A23 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE4Q96A23 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.54■■□□□ 1.04
CPNE4Q96A23 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE4Q96A23 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE4Q96A23 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE4Q96A23 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
CPNE4Q96A23 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE4Q96A23 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE4Q96A23 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.54■■□□□ 1.04
CPNE4Q96A23 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE4Q96A23 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE4Q96A23 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE4Q96A23 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE4Q96A23 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.53■■□□□ 1.04
CPNE4Q96A23 AL033527.3-201ENST00000566366 1196 ntBASIC21.53■■□□□ 1.04
CPNE4Q96A23 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE4Q96A23 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CPNE4Q96A23 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE4Q96A23 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE4Q96A23 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE4Q96A23 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 DUX4L18-201ENST00000553347 1267 ntBASIC21.52■■□□□ 1.04
CPNE4Q96A23 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.52■■□□□ 1.04
CPNE4Q96A23 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CPNE4Q96A23 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CPNE4Q96A23 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE4Q96A23 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CPNE4Q96A23 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.51■■□□□ 1.03
CPNE4Q96A23 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE4Q96A23 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE4Q96A23 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE4Q96A23 AC092803.2-201ENST00000564287 1899 ntBASIC21.49■■□□□ 1.03
CPNE4Q96A23 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CPNE4Q96A23 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE4Q96A23 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE4Q96A23 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.49■■□□□ 1.03
CPNE4Q96A23 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE4Q96A23 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE4Q96A23 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE4Q96A23 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CPNE4Q96A23 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE4Q96A23 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.48■■□□□ 1.03
CPNE4Q96A23 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE4Q96A23 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE4Q96A23 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CPNE4Q96A23 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE4Q96A23 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 AC139795.1-202ENST00000500444 432 ntBASIC21.47■■□□□ 1.03
CPNE4Q96A23 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE4Q96A23 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.47■■□□□ 1.03
CPNE4Q96A23 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE4Q96A23 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE4Q96A23 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE4Q96A23 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CPNE4Q96A23 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CPNE4Q96A23 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE4Q96A23 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE4Q96A23 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
CPNE4Q96A23 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.46■■□□□ 1.03
CPNE4Q96A23 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.46■■□□□ 1.03
CPNE4Q96A23 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CPNE4Q96A23 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE4Q96A23 AC010501.1-201ENST00000606270 1962 ntBASIC21.45■■□□□ 1.02
CPNE4Q96A23 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.45■■□□□ 1.02
CPNE4Q96A23 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE4Q96A23 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE4Q96A23 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.45■■□□□ 1.02
CPNE4Q96A23 BHLHE23-202ENST00000612929 1109 ntBASIC21.45■■□□□ 1.02
CPNE4Q96A23 AC074183.2-201ENST00000623112 922 ntBASIC21.45■■□□□ 1.02
CPNE4Q96A23 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE4Q96A23 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE4Q96A23 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.45■■□□□ 1.02
CPNE4Q96A23 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CPNE4Q96A23 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPNE4Q96A23 RPS2P7-201ENST00000447334 885 ntBASIC21.44■■□□□ 1.02
CPNE4Q96A23 AC087393.1-201ENST00000582896 145 ntBASIC21.44■■□□□ 1.02
CPNE4Q96A23 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.44■■□□□ 1.02
CPNE4Q96A23 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms