Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
UBE2FQ969M7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE2FQ969M7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBE2FQ969M7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
UBE2FQ969M7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE2FQ969M7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
UBE2FQ969M7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
UBE2FQ969M7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBE2FQ969M7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBE2FQ969M7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.86■■□□□ 1.09
UBE2FQ969M7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UBE2FQ969M7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE2FQ969M7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.85■■□□□ 1.09
UBE2FQ969M7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE2FQ969M7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UBE2FQ969M7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
UBE2FQ969M7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.85■■□□□ 1.09
UBE2FQ969M7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE2FQ969M7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE2FQ969M7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE2FQ969M7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UBE2FQ969M7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
UBE2FQ969M7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.84■■□□□ 1.09
UBE2FQ969M7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
UBE2FQ969M7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
UBE2FQ969M7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE2FQ969M7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
UBE2FQ969M7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
UBE2FQ969M7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.83■■□□□ 1.09
UBE2FQ969M7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.83■■□□□ 1.08
UBE2FQ969M7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.83■■□□□ 1.08
UBE2FQ969M7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UBE2FQ969M7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.83■■□□□ 1.08
UBE2FQ969M7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2FQ969M7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2FQ969M7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.82■■□□□ 1.08
UBE2FQ969M7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2FQ969M7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2FQ969M7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBE2FQ969M7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2FQ969M7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.81■■□□□ 1.08
UBE2FQ969M7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBE2FQ969M7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
UBE2FQ969M7 AC087741.3-201ENST00000624270 1347 ntBASIC21.8■■□□□ 1.08
UBE2FQ969M7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2FQ969M7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2FQ969M7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBE2FQ969M7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.8■■□□□ 1.08
UBE2FQ969M7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
UBE2FQ969M7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2FQ969M7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2FQ969M7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.79■■□□□ 1.08
UBE2FQ969M7 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
UBE2FQ969M7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2FQ969M7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2FQ969M7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBE2FQ969M7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.78■■□□□ 1.08
UBE2FQ969M7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBE2FQ969M7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBE2FQ969M7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE2FQ969M7 AC068473.5-201ENST00000616428 2072 ntBASIC21.78■■□□□ 1.08
UBE2FQ969M7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.77■■□□□ 1.08
UBE2FQ969M7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE2FQ969M7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE2FQ969M7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.77■■□□□ 1.08
UBE2FQ969M7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
UBE2FQ969M7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
UBE2FQ969M7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2FQ969M7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2FQ969M7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2FQ969M7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBE2FQ969M7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2FQ969M7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBE2FQ969M7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.76■■□□□ 1.07
UBE2FQ969M7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2FQ969M7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.76■■□□□ 1.07
UBE2FQ969M7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE2FQ969M7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
UBE2FQ969M7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2FQ969M7 AP003733.4-201ENST00000623785 1697 ntBASIC21.75■■□□□ 1.07
UBE2FQ969M7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.75■■□□□ 1.07
UBE2FQ969M7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2FQ969M7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBE2FQ969M7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
UBE2FQ969M7 SLC6A10P-202ENST00000431994 2058 ntBASIC21.75■■□□□ 1.07
UBE2FQ969M7 AC012676.1-201ENST00000574705 1949 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms