Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AC009299.2-201ENST00000482477 511 ntBASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
TTC9BQ8N6N2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
TTC9BQ8N6N2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TTC9BQ8N6N2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.45■■□□□ 1.66
TTC9BQ8N6N2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC9BQ8N6N2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC9BQ8N6N2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TTC9BQ8N6N2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TTC9BQ8N6N2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
TTC9BQ8N6N2 AC019171.1-201ENST00000601251 1056 ntBASIC25.44■■□□□ 1.66
TTC9BQ8N6N2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
TTC9BQ8N6N2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.44■■□□□ 1.66
TTC9BQ8N6N2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TTC9BQ8N6N2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.43■■□□□ 1.66
TTC9BQ8N6N2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
TTC9BQ8N6N2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.43■■□□□ 1.66
TTC9BQ8N6N2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC9BQ8N6N2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC9BQ8N6N2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC9BQ8N6N2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.42■■□□□ 1.66
TTC9BQ8N6N2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
TTC9BQ8N6N2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TTC9BQ8N6N2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC9BQ8N6N2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC9BQ8N6N2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TTC9BQ8N6N2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC9BQ8N6N2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC9BQ8N6N2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC9BQ8N6N2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.41■■□□□ 1.66
TTC9BQ8N6N2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TTC9BQ8N6N2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TTC9BQ8N6N2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TTC9BQ8N6N2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC9BQ8N6N2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.39■■□□□ 1.65
TTC9BQ8N6N2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC9BQ8N6N2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TTC9BQ8N6N2 AL031848.2-201ENST00000607670 837 ntBASIC25.38■■□□□ 1.65
TTC9BQ8N6N2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC9BQ8N6N2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC9BQ8N6N2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC9BQ8N6N2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC9BQ8N6N2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC9BQ8N6N2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC9BQ8N6N2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC9BQ8N6N2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC9BQ8N6N2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC9BQ8N6N2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC9BQ8N6N2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TTC9BQ8N6N2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TTC9BQ8N6N2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TTC9BQ8N6N2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TTC9BQ8N6N2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.34■■□□□ 1.65
TTC9BQ8N6N2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.34■■□□□ 1.65
TTC9BQ8N6N2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TTC9BQ8N6N2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.34■■□□□ 1.65
TTC9BQ8N6N2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
TTC9BQ8N6N2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC9BQ8N6N2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC9BQ8N6N2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.33■■□□□ 1.65
TTC9BQ8N6N2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.33■■□□□ 1.65
TTC9BQ8N6N2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC9BQ8N6N2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
TTC9BQ8N6N2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.32■■□□□ 1.64
TTC9BQ8N6N2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
TTC9BQ8N6N2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.32■■□□□ 1.64
TTC9BQ8N6N2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TTC9BQ8N6N2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TTC9BQ8N6N2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
TTC9BQ8N6N2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
TTC9BQ8N6N2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC9BQ8N6N2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC9BQ8N6N2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
TTC9BQ8N6N2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC9BQ8N6N2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC9BQ8N6N2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms