Protein–RNA interactions for Protein: Q8IW00

VSTM4, V-set and transmembrane domain-containing protein 4, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4Q8IW00 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.27■■□□□ 1.8
VSTM4Q8IW00 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.26■■□□□ 1.79
VSTM4Q8IW00 LINC01971-201ENST00000617888 1048 ntBASIC26.26■■□□□ 1.79
VSTM4Q8IW00 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
VSTM4Q8IW00 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.26■■□□□ 1.79
VSTM4Q8IW00 AP003733.4-201ENST00000623785 1697 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 AL359258.2-201ENST00000564063 1566 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L13-201ENST00000554103 1267 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L15-201ENST00000611059 1267 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L23-201ENST00000615195 1269 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L24-201ENST00000617576 1269 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L22-201ENST00000618238 1269 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L20-201ENST00000619712 1269 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L21-201ENST00000622058 1269 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L10-201ENST00000622460 1267 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DUX4L25-201ENST00000624915 1269 ntBASIC26.25■■□□□ 1.79
VSTM4Q8IW00 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
VSTM4Q8IW00 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VSTM4Q8IW00 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VSTM4Q8IW00 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VSTM4Q8IW00 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.23■■□□□ 1.79
VSTM4Q8IW00 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VSTM4Q8IW00 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VSTM4Q8IW00 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
VSTM4Q8IW00 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VSTM4Q8IW00 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.22■■□□□ 1.79
VSTM4Q8IW00 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.22■■□□□ 1.79
VSTM4Q8IW00 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VSTM4Q8IW00 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VSTM4Q8IW00 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 SLC6A10P-202ENST00000431994 2058 ntBASIC26.21■■□□□ 1.79
VSTM4Q8IW00 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VSTM4Q8IW00 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
VSTM4Q8IW00 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.2■■□□□ 1.79
VSTM4Q8IW00 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
VSTM4Q8IW00 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
VSTM4Q8IW00 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
VSTM4Q8IW00 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
VSTM4Q8IW00 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VSTM4Q8IW00 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VSTM4Q8IW00 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
VSTM4Q8IW00 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.19■■□□□ 1.78
VSTM4Q8IW00 AC097639.1-201ENST00000565519 1891 ntBASIC26.19■■□□□ 1.78
VSTM4Q8IW00 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
VSTM4Q8IW00 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
VSTM4Q8IW00 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
VSTM4Q8IW00 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
VSTM4Q8IW00 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VSTM4Q8IW00 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.17■■□□□ 1.78
VSTM4Q8IW00 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VSTM4Q8IW00 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VSTM4Q8IW00 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VSTM4Q8IW00 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VSTM4Q8IW00 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VSTM4Q8IW00 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VSTM4Q8IW00 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VSTM4Q8IW00 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VSTM4Q8IW00 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.16■■□□□ 1.78
VSTM4Q8IW00 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VSTM4Q8IW00 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.15■■□□□ 1.78
VSTM4Q8IW00 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
VSTM4Q8IW00 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VSTM4Q8IW00 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VSTM4Q8IW00 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VSTM4Q8IW00 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
VSTM4Q8IW00 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VSTM4Q8IW00 HLA-V-202ENST00000446817 847 ntBASIC26.14■■□□□ 1.78
VSTM4Q8IW00 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.14■■□□□ 1.78
VSTM4Q8IW00 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VSTM4Q8IW00 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VSTM4Q8IW00 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.14■■□□□ 1.78
VSTM4Q8IW00 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms