Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFE4Q86UQ8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFE4Q86UQ8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.03■□□□□ 0.32
NFE4Q86UQ8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFE4Q86UQ8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.03■□□□□ 0.32
NFE4Q86UQ8 AC148477.6-201ENST00000623746 465 ntBASIC17.03■□□□□ 0.32
NFE4Q86UQ8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFE4Q86UQ8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFE4Q86UQ8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFE4Q86UQ8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NFE4Q86UQ8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFE4Q86UQ8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFE4Q86UQ8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.02■□□□□ 0.31
NFE4Q86UQ8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFE4Q86UQ8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NFE4Q86UQ8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.02■□□□□ 0.31
NFE4Q86UQ8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NFE4Q86UQ8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFE4Q86UQ8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NFE4Q86UQ8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17■□□□□ 0.31
NFE4Q86UQ8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17■□□□□ 0.31
NFE4Q86UQ8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17■□□□□ 0.31
NFE4Q86UQ8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NFE4Q86UQ8 CLDN5-201ENST00000403084 2357 ntBASIC17■□□□□ 0.31
NFE4Q86UQ8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFE4Q86UQ8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFE4Q86UQ8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFE4Q86UQ8 AC126177.7-201ENST00000547904 679 ntBASIC16.99■□□□□ 0.31
NFE4Q86UQ8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFE4Q86UQ8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.99■□□□□ 0.31
NFE4Q86UQ8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
NFE4Q86UQ8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFE4Q86UQ8 AC142472.1-201ENST00000612013 1741 ntBASIC16.99■□□□□ 0.31
NFE4Q86UQ8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 GPX1-201ENST00000419349 1106 ntBASIC16.98■□□□□ 0.31
NFE4Q86UQ8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 LINC00543-201ENST00000567234 1845 ntBASIC16.98■□□□□ 0.31
NFE4Q86UQ8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.98■□□□□ 0.31
NFE4Q86UQ8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFE4Q86UQ8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.96■□□□□ 0.31
NFE4Q86UQ8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFE4Q86UQ8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFE4Q86UQ8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.96■□□□□ 0.31
NFE4Q86UQ8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.96■□□□□ 0.31
NFE4Q86UQ8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NFE4Q86UQ8 AC022413.1-201ENST00000624602 984 ntBASIC16.96■□□□□ 0.31
NFE4Q86UQ8 AL139125.2-201ENST00000623134 1869 ntBASIC16.96■□□□□ 0.31
NFE4Q86UQ8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFE4Q86UQ8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
NFE4Q86UQ8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NFE4Q86UQ8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.95■□□□□ 0.3
NFE4Q86UQ8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NFE4Q86UQ8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFE4Q86UQ8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFE4Q86UQ8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFE4Q86UQ8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.94■□□□□ 0.3
NFE4Q86UQ8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NFE4Q86UQ8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms