Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.34■■□□□ 1.97
PPP4R3AQ6IN85 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
PPP4R3AQ6IN85 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
PPP4R3AQ6IN85 AC129492.7-201ENST00000622992 756 ntBASIC27.34■■□□□ 1.97
PPP4R3AQ6IN85 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
PPP4R3AQ6IN85 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
PPP4R3AQ6IN85 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PPP4R3AQ6IN85 SPCS2P3-201ENST00000500401 656 ntBASIC27.33■■□□□ 1.97
PPP4R3AQ6IN85 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PPP4R3AQ6IN85 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.33■■□□□ 1.97
PPP4R3AQ6IN85 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.33■■□□□ 1.97
PPP4R3AQ6IN85 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
PPP4R3AQ6IN85 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.33■■□□□ 1.97
PPP4R3AQ6IN85 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
PPP4R3AQ6IN85 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.32■■□□□ 1.96
PPP4R3AQ6IN85 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PPP4R3AQ6IN85 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PPP4R3AQ6IN85 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PPP4R3AQ6IN85 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PPP4R3AQ6IN85 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PPP4R3AQ6IN85 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
PPP4R3AQ6IN85 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PPP4R3AQ6IN85 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PPP4R3AQ6IN85 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PPP4R3AQ6IN85 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PPP4R3AQ6IN85 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PPP4R3AQ6IN85 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PPP4R3AQ6IN85 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.3■■□□□ 1.96
PPP4R3AQ6IN85 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.29■■□□□ 1.96
PPP4R3AQ6IN85 DUX4L9-201ENST00000449051 1259 ntBASIC27.29■■□□□ 1.96
PPP4R3AQ6IN85 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PPP4R3AQ6IN85 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
PPP4R3AQ6IN85 AC096887.2-201ENST00000623443 1957 ntBASIC27.29■■□□□ 1.96
PPP4R3AQ6IN85 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.28■■□□□ 1.96
PPP4R3AQ6IN85 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.28■■□□□ 1.96
PPP4R3AQ6IN85 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PPP4R3AQ6IN85 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
PPP4R3AQ6IN85 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PPP4R3AQ6IN85 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PPP4R3AQ6IN85 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
PPP4R3AQ6IN85 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PPP4R3AQ6IN85 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PPP4R3AQ6IN85 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
PPP4R3AQ6IN85 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PPP4R3AQ6IN85 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PPP4R3AQ6IN85 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PPP4R3AQ6IN85 AC018755.3-202ENST00000596210 929 ntBASIC27.26■■□□□ 1.95
PPP4R3AQ6IN85 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
PPP4R3AQ6IN85 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PPP4R3AQ6IN85 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
PPP4R3AQ6IN85 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.25■■□□□ 1.95
PPP4R3AQ6IN85 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
PPP4R3AQ6IN85 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PPP4R3AQ6IN85 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PPP4R3AQ6IN85 KRT18P10-201ENST00000388836 1287 ntBASIC27.24■■□□□ 1.95
PPP4R3AQ6IN85 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.24■■□□□ 1.95
PPP4R3AQ6IN85 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
PPP4R3AQ6IN85 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PPP4R3AQ6IN85 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.23■■□□□ 1.95
PPP4R3AQ6IN85 MIR6765-201ENST00000614092 87 ntBASIC27.23■■□□□ 1.95
PPP4R3AQ6IN85 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PPP4R3AQ6IN85 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
PPP4R3AQ6IN85 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PPP4R3AQ6IN85 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.22■■□□□ 1.95
PPP4R3AQ6IN85 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.21■■□□□ 1.95
PPP4R3AQ6IN85 AC004987.1-201ENST00000428627 508 ntBASIC27.21■■□□□ 1.95
PPP4R3AQ6IN85 AC012354.3-201ENST00000623734 483 ntBASIC27.21■■□□□ 1.95
PPP4R3AQ6IN85 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.21■■□□□ 1.95
PPP4R3AQ6IN85 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.2■■□□□ 1.95
PPP4R3AQ6IN85 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.95
PPP4R3AQ6IN85 ATP5G2P3-201ENST00000429083 425 ntBASIC27.2■■□□□ 1.94
PPP4R3AQ6IN85 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PPP4R3AQ6IN85 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PPP4R3AQ6IN85 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PPP4R3AQ6IN85 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PPP4R3AQ6IN85 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
PPP4R3AQ6IN85 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.18■■□□□ 1.94
PPP4R3AQ6IN85 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PPP4R3AQ6IN85 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PPP4R3AQ6IN85 TSPY13P-201ENST00000338964 914 ntBASIC27.16■■□□□ 1.94
PPP4R3AQ6IN85 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PPP4R3AQ6IN85 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms