Protein–RNA interactions for Protein: P98164

LRP2, Low-density lipoprotein receptor-related protein 2, humanhuman

Predictions only

Length 4,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP2P98164 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.65□□□□□ -0.22
LRP2P98164 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRP2P98164 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRP2P98164 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.65□□□□□ -0.23
LRP2P98164 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.64□□□□□ -0.23
LRP2P98164 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRP2P98164 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.64□□□□□ -0.23
LRP2P98164 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRP2P98164 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.64□□□□□ -0.23
LRP2P98164 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRP2P98164 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRP2P98164 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.64□□□□□ -0.23
LRP2P98164 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.64□□□□□ -0.23
LRP2P98164 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LRP2P98164 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRP2P98164 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.63□□□□□ -0.23
LRP2P98164 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC13.63□□□□□ -0.23
LRP2P98164 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRP2P98164 RARRES2P11-201ENST00000635158 484 ntBASIC13.63□□□□□ -0.23
LRP2P98164 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.63□□□□□ -0.23
LRP2P98164 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.63□□□□□ -0.23
LRP2P98164 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC13.63□□□□□ -0.23
LRP2P98164 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.62□□□□□ -0.23
LRP2P98164 AL355001.2-201ENST00000620617 1191 ntBASIC13.62□□□□□ -0.23
LRP2P98164 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC13.62□□□□□ -0.23
LRP2P98164 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 ABCB10P3-201ENST00000561950 2166 ntBASIC13.62□□□□□ -0.23
LRP2P98164 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LRP2P98164 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LRP2P98164 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP2P98164 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRP2P98164 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.61□□□□□ -0.23
LRP2P98164 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LRP2P98164 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC13.61□□□□□ -0.23
LRP2P98164 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC13.61□□□□□ -0.23
LRP2P98164 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRP2P98164 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LRP2P98164 AC105265.2-201ENST00000467189 838 ntBASIC13.61□□□□□ -0.23
LRP2P98164 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRP2P98164 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LRP2P98164 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRP2P98164 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
LRP2P98164 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 PBX2P1-201ENST00000493219 1291 ntBASIC13.6□□□□□ -0.23
LRP2P98164 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.6□□□□□ -0.23
LRP2P98164 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
LRP2P98164 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.6□□□□□ -0.23
LRP2P98164 AL139393.2-201ENST00000608721 2025 ntBASIC13.6□□□□□ -0.23
LRP2P98164 KRT18P24-201ENST00000344739 1156 ntBASIC13.6□□□□□ -0.23
LRP2P98164 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.6□□□□□ -0.23
LRP2P98164 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.6□□□□□ -0.23
LRP2P98164 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC13.6□□□□□ -0.23
LRP2P98164 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRP2P98164 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC13.59□□□□□ -0.23
LRP2P98164 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRP2P98164 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LRP2P98164 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.59□□□□□ -0.23
LRP2P98164 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC13.59□□□□□ -0.23
LRP2P98164 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
LRP2P98164 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRP2P98164 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.59□□□□□ -0.23
LRP2P98164 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRP2P98164 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.58□□□□□ -0.23
LRP2P98164 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRP2P98164 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRP2P98164 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.58□□□□□ -0.24
LRP2P98164 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC13.58□□□□□ -0.24
LRP2P98164 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LRP2P98164 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC13.58□□□□□ -0.24
LRP2P98164 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRP2P98164 AC010997.5-201ENST00000609182 354 ntBASIC13.58□□□□□ -0.24
LRP2P98164 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LRP2P98164 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRP2P98164 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
LRP2P98164 MIR6724-1-201ENST00000616420 92 ntBASIC13.58□□□□□ -0.24
LRP2P98164 MIR6724-2-201ENST00000616483 92 ntBASIC13.58□□□□□ -0.24
LRP2P98164 MIR6724-4-201ENST00000617390 92 ntBASIC13.58□□□□□ -0.24
LRP2P98164 MIR6724-3-201ENST00000622482 92 ntBASIC13.58□□□□□ -0.24
LRP2P98164 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRP2P98164 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.57□□□□□ -0.24
LRP2P98164 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRP2P98164 ABCB10P1-201ENST00000614297 2181 ntBASIC13.57□□□□□ -0.24
LRP2P98164 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
LRP2P98164 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.57□□□□□ -0.24
LRP2P98164 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRP2P98164 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.57□□□□□ -0.24
LRP2P98164 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.57□□□□□ -0.24
LRP2P98164 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms