Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 RARRES2P1-201ENST00000474487 481 ntBASIC19.51■□□□□ 0.71
SAA4P35542 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.51■□□□□ 0.71
SAA4P35542 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.51■□□□□ 0.71
SAA4P35542 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SAA4P35542 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SAA4P35542 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SAA4P35542 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SAA4P35542 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SAA4P35542 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SAA4P35542 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.5■□□□□ 0.71
SAA4P35542 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SAA4P35542 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.5■□□□□ 0.71
SAA4P35542 RPS2P7-201ENST00000447334 885 ntBASIC19.5■□□□□ 0.71
SAA4P35542 AC087393.1-201ENST00000582896 145 ntBASIC19.5■□□□□ 0.71
SAA4P35542 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SAA4P35542 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SAA4P35542 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SAA4P35542 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.49■□□□□ 0.71
SAA4P35542 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.49■□□□□ 0.71
SAA4P35542 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SAA4P35542 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SAA4P35542 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.49■□□□□ 0.71
SAA4P35542 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA4P35542 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.48■□□□□ 0.71
SAA4P35542 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA4P35542 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.48■□□□□ 0.71
SAA4P35542 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.48■□□□□ 0.71
SAA4P35542 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA4P35542 KRT8P33-201ENST00000508125 1423 ntBASIC19.48■□□□□ 0.71
SAA4P35542 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA4P35542 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SAA4P35542 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.48■□□□□ 0.71
SAA4P35542 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA4P35542 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.47■□□□□ 0.71
SAA4P35542 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA4P35542 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SAA4P35542 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.47■□□□□ 0.71
SAA4P35542 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SAA4P35542 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SAA4P35542 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SAA4P35542 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SAA4P35542 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SAA4P35542 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SAA4P35542 PVT1_1.1-201ENST00000615125 194 ntBASIC19.46■□□□□ 0.71
SAA4P35542 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA4P35542 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA4P35542 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.45■□□□□ 0.7
SAA4P35542 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA4P35542 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA4P35542 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SAA4P35542 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SAA4P35542 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SAA4P35542 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.45■□□□□ 0.7
SAA4P35542 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SAA4P35542 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA4P35542 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SAA4P35542 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.44■□□□□ 0.7
SAA4P35542 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SAA4P35542 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA4P35542 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.44■□□□□ 0.7
SAA4P35542 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA4P35542 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.44■□□□□ 0.7
SAA4P35542 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SAA4P35542 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.43■□□□□ 0.7
SAA4P35542 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SAA4P35542 YBX1P4-201ENST00000392794 808 ntBASIC19.43■□□□□ 0.7
SAA4P35542 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.43■□□□□ 0.7
SAA4P35542 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.43■□□□□ 0.7
SAA4P35542 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SAA4P35542 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.43■□□□□ 0.7
SAA4P35542 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SAA4P35542 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SAA4P35542 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA4P35542 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SAA4P35542 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SAA4P35542 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA4P35542 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.42■□□□□ 0.7
SAA4P35542 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA4P35542 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.42■□□□□ 0.7
SAA4P35542 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA4P35542 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SAA4P35542 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
SAA4P35542 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
SAA4P35542 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA4P35542 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SAA4P35542 LONRF2P2-201ENST00000439212 571 ntBASIC19.41■□□□□ 0.7
SAA4P35542 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.41■□□□□ 0.7
SAA4P35542 AC019171.1-201ENST00000601251 1056 ntBASIC19.41■□□□□ 0.7
SAA4P35542 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAA4P35542 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAA4P35542 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.4■□□□□ 0.7
SAA4P35542 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.4■□□□□ 0.7
SAA4P35542 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SAA4P35542 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SAA4P35542 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SAA4P35542 AC103834.1-201ENST00000520383 144 ntBASIC19.39■□□□□ 0.69
SAA4P35542 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.39■□□□□ 0.69
SAA4P35542 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SAA4P35542 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SAA4P35542 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms