Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GDF1P27539 RPS2P7-201ENST00000447334 885 ntBASIC21.85■■□□□ 1.09
GDF1P27539 KRT8P33-201ENST00000508125 1423 ntBASIC21.85■■□□□ 1.09
GDF1P27539 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.84■■□□□ 1.09
GDF1P27539 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.84■■□□□ 1.09
GDF1P27539 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.83■■□□□ 1.09
GDF1P27539 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 AC087393.1-201ENST00000582896 145 ntBASIC21.83■■□□□ 1.09
GDF1P27539 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
GDF1P27539 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.83■■□□□ 1.08
GDF1P27539 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GDF1P27539 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDF1P27539 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDF1P27539 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.82■■□□□ 1.08
GDF1P27539 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.82■■□□□ 1.08
GDF1P27539 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.82■■□□□ 1.08
GDF1P27539 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GDF1P27539 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GDF1P27539 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GDF1P27539 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.81■■□□□ 1.08
GDF1P27539 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDF1P27539 AL121749.1-202ENST00000609313 2153 ntBASIC21.8■■□□□ 1.08
GDF1P27539 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDF1P27539 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.8■■□□□ 1.08
GDF1P27539 YBX1P4-201ENST00000392794 808 ntBASIC21.8■■□□□ 1.08
GDF1P27539 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDF1P27539 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.79■■□□□ 1.08
GDF1P27539 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.79■■□□□ 1.08
GDF1P27539 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.79■■□□□ 1.08
GDF1P27539 PVT1_1.1-201ENST00000615125 194 ntBASIC21.79■■□□□ 1.08
GDF1P27539 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.79■■□□□ 1.08
GDF1P27539 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GDF1P27539 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.78■■□□□ 1.08
GDF1P27539 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.77■■□□□ 1.08
GDF1P27539 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GDF1P27539 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.77■■□□□ 1.08
GDF1P27539 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.77■■□□□ 1.08
GDF1P27539 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
GDF1P27539 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.77■■□□□ 1.08
GDF1P27539 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GDF1P27539 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
GDF1P27539 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GDF1P27539 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.76■■□□□ 1.07
GDF1P27539 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GDF1P27539 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GDF1P27539 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GDF1P27539 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.75■■□□□ 1.07
GDF1P27539 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF1P27539 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF1P27539 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.75■■□□□ 1.07
GDF1P27539 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GDF1P27539 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.74■■□□□ 1.07
GDF1P27539 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GDF1P27539 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GDF1P27539 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GDF1P27539 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
GDF1P27539 LONRF2P2-201ENST00000439212 571 ntBASIC21.73■■□□□ 1.07
GDF1P27539 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.73■■□□□ 1.07
GDF1P27539 AC019171.1-201ENST00000601251 1056 ntBASIC21.73■■□□□ 1.07
GDF1P27539 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.73■■□□□ 1.07
GDF1P27539 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.72■■□□□ 1.07
GDF1P27539 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GDF1P27539 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF1P27539 AC103834.1-201ENST00000520383 144 ntBASIC21.72■■□□□ 1.07
GDF1P27539 MIR4508-201ENST00000584178 70 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms