Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.06■■■□□ 2.56
SNRPA1P09661 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNRPA1P09661 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SNRPA1P09661 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SNRPA1P09661 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.05■■■□□ 2.56
SNRPA1P09661 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SNRPA1P09661 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.04■■■□□ 2.56
SNRPA1P09661 GUSBP5-201ENST00000418136 578 ntBASIC31.04■■■□□ 2.56
SNRPA1P09661 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
SNRPA1P09661 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SNRPA1P09661 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.04■■■□□ 2.56
SNRPA1P09661 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.03■■■□□ 2.56
SNRPA1P09661 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNRPA1P09661 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNRPA1P09661 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.02■■■□□ 2.56
SNRPA1P09661 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
SNRPA1P09661 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SNRPA1P09661 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SNRPA1P09661 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SNRPA1P09661 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31■■■□□ 2.55
SNRPA1P09661 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31■■■□□ 2.55
SNRPA1P09661 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
SNRPA1P09661 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SNRPA1P09661 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SNRPA1P09661 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SNRPA1P09661 AC022616.5-201ENST00000518796 181 ntBASIC30.98■■■□□ 2.55
SNRPA1P09661 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.98■■■□□ 2.55
SNRPA1P09661 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.98■■■□□ 2.55
SNRPA1P09661 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SNRPA1P09661 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SNRPA1P09661 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.97■■■□□ 2.55
SNRPA1P09661 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SNRPA1P09661 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SNRPA1P09661 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.96■■■□□ 2.55
SNRPA1P09661 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SNRPA1P09661 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.95■■■□□ 2.55
SNRPA1P09661 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SNRPA1P09661 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SNRPA1P09661 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SNRPA1P09661 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
SNRPA1P09661 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.95■■■□□ 2.55
SNRPA1P09661 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.95■■■□□ 2.55
SNRPA1P09661 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
SNRPA1P09661 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
SNRPA1P09661 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.94■■■□□ 2.54
SNRPA1P09661 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SNRPA1P09661 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SNRPA1P09661 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNRPA1P09661 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.93■■■□□ 2.54
SNRPA1P09661 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNRPA1P09661 AC239859.2-201ENST00000444165 318 ntBASIC30.92■■■□□ 2.54
SNRPA1P09661 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.92■■■□□ 2.54
SNRPA1P09661 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNRPA1P09661 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNRPA1P09661 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNRPA1P09661 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNRPA1P09661 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNRPA1P09661 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNRPA1P09661 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.9■■■□□ 2.54
SNRPA1P09661 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.9■■■□□ 2.54
SNRPA1P09661 Z92544.1-202ENST00000571933 1220 ntBASIC30.9■■■□□ 2.54
SNRPA1P09661 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNRPA1P09661 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.89■■■□□ 2.54
SNRPA1P09661 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.89■■■□□ 2.54
SNRPA1P09661 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
SNRPA1P09661 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.89■■■□□ 2.53
SNRPA1P09661 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
SNRPA1P09661 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.89■■■□□ 2.53
SNRPA1P09661 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.89■■■□□ 2.53
SNRPA1P09661 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
SNRPA1P09661 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.88■■■□□ 2.53
SNRPA1P09661 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SNRPA1P09661 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SNRPA1P09661 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SNRPA1P09661 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
SNRPA1P09661 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
SNRPA1P09661 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
SNRPA1P09661 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SNRPA1P09661 KRT18P24-201ENST00000344739 1156 ntBASIC30.87■■■□□ 2.53
SNRPA1P09661 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SNRPA1P09661 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
SNRPA1P09661 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
SNRPA1P09661 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SNRPA1P09661 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SNRPA1P09661 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
SNRPA1P09661 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SNRPA1P09661 THA1P-201ENST00000590384 1145 ntBASIC30.84■■■□□ 2.53
SNRPA1P09661 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
SNRPA1P09661 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SNRPA1P09661 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
SNRPA1P09661 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.83■■■□□ 2.53
SNRPA1P09661 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
SNRPA1P09661 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SNRPA1P09661 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.82■■■□□ 2.52
SNRPA1P09661 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.82■■■□□ 2.52
SNRPA1P09661 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.82■■■□□ 2.52
SNRPA1P09661 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SNRPA1P09661 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
SNRPA1P09661 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.82■■■□□ 2.52
SNRPA1P09661 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms