Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
APOBP04114 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.36■□□□□ 0.05
APOBP04114 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
APOBP04114 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
APOBP04114 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
APOBP04114 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
APOBP04114 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
APOBP04114 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
APOBP04114 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.36■□□□□ 0.05
APOBP04114 TSPY9P-201ENST00000440215 945 ntBASIC15.36■□□□□ 0.05
APOBP04114 TSPY11P-201ENST00000442607 1045 ntBASIC15.36■□□□□ 0.05
APOBP04114 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.36■□□□□ 0.05
APOBP04114 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.36■□□□□ 0.05
APOBP04114 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APOBP04114 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.35■□□□□ 0.05
APOBP04114 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.35■□□□□ 0.05
APOBP04114 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.35■□□□□ 0.05
APOBP04114 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
APOBP04114 MIR5787-201ENST00000611784 55 ntBASIC15.35■□□□□ 0.05
APOBP04114 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APOBP04114 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APOBP04114 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APOBP04114 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.35■□□□□ 0.05
APOBP04114 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
APOBP04114 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
APOBP04114 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APOBP04114 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.35■□□□□ 0.05
APOBP04114 KRT18P24-201ENST00000344739 1156 ntBASIC15.34■□□□□ 0.05
APOBP04114 AC104564.3-201ENST00000582367 638 ntBASIC15.34■□□□□ 0.05
APOBP04114 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
APOBP04114 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APOBP04114 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.34■□□□□ 0.05
APOBP04114 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APOBP04114 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.34■□□□□ 0.05
APOBP04114 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
APOBP04114 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.34■□□□□ 0.05
APOBP04114 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.34■□□□□ 0.05
APOBP04114 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APOBP04114 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
APOBP04114 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.33■□□□□ 0.05
APOBP04114 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.33■□□□□ 0.05
APOBP04114 SUDS3P1-201ENST00000505831 966 ntBASIC15.33■□□□□ 0.05
APOBP04114 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
APOBP04114 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.33■□□□□ 0.04
APOBP04114 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.33■□□□□ 0.04
APOBP04114 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
APOBP04114 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
APOBP04114 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.33■□□□□ 0.04
APOBP04114 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.33■□□□□ 0.04
APOBP04114 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APOBP04114 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.33■□□□□ 0.04
APOBP04114 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOBP04114 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOBP04114 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOBP04114 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOBP04114 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOBP04114 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.32■□□□□ 0.04
APOBP04114 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APOBP04114 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOBP04114 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.31■□□□□ 0.04
APOBP04114 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APOBP04114 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOBP04114 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.31■□□□□ 0.04
APOBP04114 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOBP04114 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOBP04114 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APOBP04114 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC15.31■□□□□ 0.04
APOBP04114 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOBP04114 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.3■□□□□ 0.04
APOBP04114 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.3■□□□□ 0.04
APOBP04114 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.3■□□□□ 0.04
APOBP04114 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.3■□□□□ 0.04
APOBP04114 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.3■□□□□ 0.04
APOBP04114 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOBP04114 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.3■□□□□ 0.04
APOBP04114 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
APOBP04114 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC15.29■□□□□ 0.04
APOBP04114 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
APOBP04114 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
APOBP04114 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APOBP04114 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APOBP04114 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APOBP04114 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOBP04114 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
APOBP04114 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.28■□□□□ 0.04
APOBP04114 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.28■□□□□ 0.04
APOBP04114 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.28■□□□□ 0.04
APOBP04114 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APOBP04114 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.27■□□□□ 0.04
APOBP04114 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.27■□□□□ 0.04
APOBP04114 MIR4281-201ENST00000580852 62 ntBASIC15.27■□□□□ 0.04
APOBP04114 AC010997.5-201ENST00000609182 354 ntBASIC15.27■□□□□ 0.04
APOBP04114 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.27■□□□□ 0.04
APOBP04114 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APOBP04114 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.27■□□□□ 0.03
APOBP04114 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOBP04114 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOBP04114 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
APOBP04114 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
APOBP04114 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms