Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CSPG5O95196 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CSPG5O95196 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.9■■□□□ 1.74
CSPG5O95196 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
CSPG5O95196 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CSPG5O95196 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
CSPG5O95196 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CSPG5O95196 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CSPG5O95196 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
CSPG5O95196 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSPG5O95196 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CSPG5O95196 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CSPG5O95196 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSPG5O95196 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.88■■□□□ 1.73
CSPG5O95196 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.88■■□□□ 1.73
CSPG5O95196 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.88■■□□□ 1.73
CSPG5O95196 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CSPG5O95196 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CSPG5O95196 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CSPG5O95196 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSPG5O95196 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.87■■□□□ 1.73
CSPG5O95196 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CSPG5O95196 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.87■■□□□ 1.73
CSPG5O95196 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.87■■□□□ 1.73
CSPG5O95196 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.87■■□□□ 1.73
CSPG5O95196 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.86■■□□□ 1.73
CSPG5O95196 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.86■■□□□ 1.73
CSPG5O95196 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CSPG5O95196 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
CSPG5O95196 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CSPG5O95196 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CSPG5O95196 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CSPG5O95196 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSPG5O95196 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
CSPG5O95196 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSPG5O95196 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSPG5O95196 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CSPG5O95196 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.84■■□□□ 1.73
CSPG5O95196 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CSPG5O95196 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CSPG5O95196 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CSPG5O95196 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.83■■□□□ 1.73
CSPG5O95196 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
CSPG5O95196 AL449106.1-201ENST00000608517 1980 ntBASIC25.83■■□□□ 1.73
CSPG5O95196 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CSPG5O95196 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
CSPG5O95196 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.82■■□□□ 1.72
CSPG5O95196 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CSPG5O95196 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSPG5O95196 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.81■■□□□ 1.72
CSPG5O95196 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CSPG5O95196 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CSPG5O95196 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CSPG5O95196 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
CSPG5O95196 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSPG5O95196 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSPG5O95196 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.8■■□□□ 1.72
CSPG5O95196 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSPG5O95196 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSPG5O95196 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSPG5O95196 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CSPG5O95196 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CSPG5O95196 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CSPG5O95196 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CSPG5O95196 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
CSPG5O95196 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
CSPG5O95196 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CSPG5O95196 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CSPG5O95196 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
CSPG5O95196 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CSPG5O95196 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.77■■□□□ 1.72
CSPG5O95196 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CSPG5O95196 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.77■■□□□ 1.72
CSPG5O95196 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.77■■□□□ 1.72
CSPG5O95196 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.77■■□□□ 1.72
CSPG5O95196 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CSPG5O95196 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CSPG5O95196 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.76■■□□□ 1.71
CSPG5O95196 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CSPG5O95196 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CSPG5O95196 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CSPG5O95196 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CSPG5O95196 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CSPG5O95196 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.75■■□□□ 1.71
CSPG5O95196 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CSPG5O95196 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.75■■□□□ 1.71
CSPG5O95196 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
CSPG5O95196 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
CSPG5O95196 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
CSPG5O95196 MIR638-201ENST00000385237 100 ntBASIC25.74■■□□□ 1.71
CSPG5O95196 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.74■■□□□ 1.71
CSPG5O95196 AC120024.1-201ENST00000562672 995 ntBASIC25.74■■□□□ 1.71
CSPG5O95196 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.74■■□□□ 1.71
CSPG5O95196 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CSPG5O95196 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CSPG5O95196 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSPG5O95196 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSPG5O95196 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.73■■□□□ 1.71
CSPG5O95196 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.73■■□□□ 1.71
CSPG5O95196 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms