Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
KCNQ3O43525 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.27■■■□□ 2.6
KCNQ3O43525 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
KCNQ3O43525 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.26■■■□□ 2.59
KCNQ3O43525 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.25■■■□□ 2.59
KCNQ3O43525 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.25■■■□□ 2.59
KCNQ3O43525 AL031848.2-201ENST00000607670 837 ntBASIC31.25■■■□□ 2.59
KCNQ3O43525 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
KCNQ3O43525 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
KCNQ3O43525 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
KCNQ3O43525 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
KCNQ3O43525 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
KCNQ3O43525 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.24■■■□□ 2.59
KCNQ3O43525 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
KCNQ3O43525 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
KCNQ3O43525 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
KCNQ3O43525 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
KCNQ3O43525 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
KCNQ3O43525 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
KCNQ3O43525 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
KCNQ3O43525 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
KCNQ3O43525 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.21■■■□□ 2.59
KCNQ3O43525 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
KCNQ3O43525 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
KCNQ3O43525 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.21■■■□□ 2.59
KCNQ3O43525 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.21■■■□□ 2.59
KCNQ3O43525 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
KCNQ3O43525 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
KCNQ3O43525 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.2■■■□□ 2.59
KCNQ3O43525 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
KCNQ3O43525 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
KCNQ3O43525 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
KCNQ3O43525 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
KCNQ3O43525 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.19■■■□□ 2.58
KCNQ3O43525 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
KCNQ3O43525 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
KCNQ3O43525 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.19■■■□□ 2.58
KCNQ3O43525 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.19■■■□□ 2.58
KCNQ3O43525 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
KCNQ3O43525 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KCNQ3O43525 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KCNQ3O43525 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.18■■■□□ 2.58
KCNQ3O43525 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.18■■■□□ 2.58
KCNQ3O43525 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
KCNQ3O43525 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
KCNQ3O43525 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.16■■■□□ 2.58
KCNQ3O43525 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
KCNQ3O43525 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.16■■■□□ 2.58
KCNQ3O43525 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
KCNQ3O43525 GUSBP5-201ENST00000418136 578 ntBASIC31.16■■■□□ 2.58
KCNQ3O43525 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNQ3O43525 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNQ3O43525 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNQ3O43525 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
KCNQ3O43525 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.15■■■□□ 2.58
KCNQ3O43525 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.14■■■□□ 2.58
KCNQ3O43525 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
KCNQ3O43525 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
KCNQ3O43525 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.14■■■□□ 2.58
KCNQ3O43525 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.13■■■□□ 2.57
KCNQ3O43525 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
KCNQ3O43525 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
KCNQ3O43525 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNQ3O43525 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
KCNQ3O43525 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.11■■■□□ 2.57
KCNQ3O43525 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
KCNQ3O43525 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
KCNQ3O43525 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
KCNQ3O43525 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
KCNQ3O43525 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
KCNQ3O43525 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
KCNQ3O43525 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
KCNQ3O43525 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.09■■■□□ 2.57
KCNQ3O43525 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
KCNQ3O43525 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.08■■■□□ 2.57
KCNQ3O43525 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.08■■■□□ 2.57
KCNQ3O43525 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
KCNQ3O43525 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
KCNQ3O43525 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
KCNQ3O43525 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.07■■■□□ 2.56
KCNQ3O43525 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
KCNQ3O43525 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
KCNQ3O43525 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
KCNQ3O43525 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.07■■■□□ 2.56
KCNQ3O43525 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
KCNQ3O43525 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
KCNQ3O43525 AC239859.2-201ENST00000444165 318 ntBASIC31.06■■■□□ 2.56
KCNQ3O43525 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.06■■■□□ 2.56
KCNQ3O43525 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
KCNQ3O43525 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.05■■■□□ 2.56
KCNQ3O43525 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNQ3O43525 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNQ3O43525 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNQ3O43525 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.05■■■□□ 2.56
KCNQ3O43525 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
KCNQ3O43525 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
KCNQ3O43525 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.04■■■□□ 2.56
KCNQ3O43525 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.04■■■□□ 2.56
KCNQ3O43525 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
KCNQ3O43525 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms