Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARHGEF9O43307 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARHGEF9O43307 AC093323.1-202ENST00000635031 2045 ntBASIC21.97■■□□□ 1.11
ARHGEF9O43307 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ARHGEF9O43307 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ARHGEF9O43307 AC145676.1-201ENST00000514988 2004 ntBASIC21.97■■□□□ 1.11
ARHGEF9O43307 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.97■■□□□ 1.11
ARHGEF9O43307 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.96■■□□□ 1.11
ARHGEF9O43307 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
ARHGEF9O43307 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.96■■□□□ 1.11
ARHGEF9O43307 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.96■■□□□ 1.11
ARHGEF9O43307 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
ARHGEF9O43307 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF9O43307 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.96■■□□□ 1.11
ARHGEF9O43307 AC092803.2-201ENST00000564287 1899 ntBASIC21.96■■□□□ 1.11
ARHGEF9O43307 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ARHGEF9O43307 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARHGEF9O43307 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.95■■□□□ 1.1
ARHGEF9O43307 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.95■■□□□ 1.1
ARHGEF9O43307 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.95■■□□□ 1.1
ARHGEF9O43307 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARHGEF9O43307 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARHGEF9O43307 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ARHGEF9O43307 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF9O43307 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ARHGEF9O43307 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARHGEF9O43307 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARHGEF9O43307 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
ARHGEF9O43307 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARHGEF9O43307 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.93■■□□□ 1.1
ARHGEF9O43307 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
ARHGEF9O43307 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.93■■□□□ 1.1
ARHGEF9O43307 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARHGEF9O43307 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ARHGEF9O43307 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARHGEF9O43307 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.91■■□□□ 1.1
ARHGEF9O43307 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.91■■□□□ 1.1
ARHGEF9O43307 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.91■■□□□ 1.1
ARHGEF9O43307 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ARHGEF9O43307 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ARHGEF9O43307 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ARHGEF9O43307 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ARHGEF9O43307 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ARHGEF9O43307 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ARHGEF9O43307 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ARHGEF9O43307 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
ARHGEF9O43307 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.9■■□□□ 1.1
ARHGEF9O43307 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ARHGEF9O43307 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ARHGEF9O43307 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ARHGEF9O43307 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.89■■□□□ 1.1
ARHGEF9O43307 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
ARHGEF9O43307 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ARHGEF9O43307 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ARHGEF9O43307 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ARHGEF9O43307 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ARHGEF9O43307 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ARHGEF9O43307 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ARHGEF9O43307 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
ARHGEF9O43307 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ARHGEF9O43307 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ARHGEF9O43307 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF9O43307 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF9O43307 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF9O43307 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.88■■□□□ 1.09
ARHGEF9O43307 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
ARHGEF9O43307 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF9O43307 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF9O43307 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.88■■□□□ 1.09
ARHGEF9O43307 AL359258.2-201ENST00000564063 1566 ntBASIC21.87■■□□□ 1.09
ARHGEF9O43307 DUSP8P4-201ENST00000399538 1761 ntBASIC21.87■■□□□ 1.09
ARHGEF9O43307 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ARHGEF9O43307 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF9O43307 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF9O43307 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF9O43307 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.87■■□□□ 1.09
ARHGEF9O43307 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
ARHGEF9O43307 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF9O43307 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ARHGEF9O43307 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF9O43307 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF9O43307 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ARHGEF9O43307 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ARHGEF9O43307 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
ARHGEF9O43307 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ARHGEF9O43307 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.85■■□□□ 1.09
ARHGEF9O43307 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ARHGEF9O43307 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ARHGEF9O43307 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms