Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC33A1O00400 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC33A1O00400 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC33A1O00400 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC33A1O00400 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC33A1O00400 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC33A1O00400 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC33A1O00400 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SLC33A1O00400 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC33A1O00400 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.33■□□□□ 0.84
SLC33A1O00400 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC33A1O00400 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC33A1O00400 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC33A1O00400 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC33A1O00400 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC33A1O00400 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC33A1O00400 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC33A1O00400 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC33A1O00400 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC33A1O00400 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC33A1O00400 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC33A1O00400 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC33A1O00400 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC33A1O00400 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC33A1O00400 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC33A1O00400 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC33A1O00400 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC33A1O00400 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC33A1O00400 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC33A1O00400 AL157400.5-201ENST00000507624 621 ntBASIC20.3■□□□□ 0.84
SLC33A1O00400 AC060814.1-201ENST00000554326 538 ntBASIC20.3■□□□□ 0.84
SLC33A1O00400 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC33A1O00400 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC33A1O00400 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC33A1O00400 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC33A1O00400 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC33A1O00400 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC33A1O00400 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC33A1O00400 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC33A1O00400 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC33A1O00400 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC33A1O00400 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC33A1O00400 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC33A1O00400 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC33A1O00400 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC33A1O00400 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC33A1O00400 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SLC33A1O00400 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC33A1O00400 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC33A1O00400 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC33A1O00400 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC33A1O00400 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC33A1O00400 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC33A1O00400 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SLC33A1O00400 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.27■□□□□ 0.83
SLC33A1O00400 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SLC33A1O00400 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC33A1O00400 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.26■□□□□ 0.83
SLC33A1O00400 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC33A1O00400 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC33A1O00400 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC33A1O00400 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC33A1O00400 AC096887.2-201ENST00000623443 1957 ntBASIC20.26■□□□□ 0.83
SLC33A1O00400 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC33A1O00400 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC33A1O00400 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC33A1O00400 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC33A1O00400 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC33A1O00400 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC33A1O00400 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC33A1O00400 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC33A1O00400 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC33A1O00400 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC33A1O00400 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC33A1O00400 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC33A1O00400 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC33A1O00400 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC33A1O00400 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC33A1O00400 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC33A1O00400 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC33A1O00400 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC33A1O00400 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC33A1O00400 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC33A1O00400 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC33A1O00400 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC33A1O00400 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SLC33A1O00400 AC025884.2-201ENST00000553429 711 ntBASIC20.23■□□□□ 0.83
SLC33A1O00400 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC33A1O00400 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC33A1O00400 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC33A1O00400 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC33A1O00400 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC33A1O00400 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms