Protein–RNA interactions for Protein: B4DS77

SHISA9, Protein shisa-9, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9B4DS77 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.7■□□□□ 0.9
SHISA9B4DS77 AL031848.2-201ENST00000607670 837 ntBASIC20.7■□□□□ 0.9
SHISA9B4DS77 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA9B4DS77 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA9B4DS77 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.69■□□□□ 0.9
SHISA9B4DS77 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA9B4DS77 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.69■□□□□ 0.9
SHISA9B4DS77 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA9B4DS77 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA9B4DS77 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SHISA9B4DS77 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA9B4DS77 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA9B4DS77 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA9B4DS77 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA9B4DS77 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA9B4DS77 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SHISA9B4DS77 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SHISA9B4DS77 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA9B4DS77 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA9B4DS77 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SHISA9B4DS77 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA9B4DS77 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.67■□□□□ 0.9
SHISA9B4DS77 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.67■□□□□ 0.9
SHISA9B4DS77 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.67■□□□□ 0.9
SHISA9B4DS77 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.67■□□□□ 0.9
SHISA9B4DS77 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA9B4DS77 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.67■□□□□ 0.9
SHISA9B4DS77 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA9B4DS77 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
SHISA9B4DS77 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA9B4DS77 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.66■□□□□ 0.9
SHISA9B4DS77 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHISA9B4DS77 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.66■□□□□ 0.9
SHISA9B4DS77 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA9B4DS77 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA9B4DS77 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA9B4DS77 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA9B4DS77 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA9B4DS77 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SHISA9B4DS77 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA9B4DS77 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA9B4DS77 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA9B4DS77 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SHISA9B4DS77 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SHISA9B4DS77 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA9B4DS77 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.63■□□□□ 0.89
SHISA9B4DS77 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHISA9B4DS77 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.63■□□□□ 0.89
SHISA9B4DS77 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA9B4DS77 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHISA9B4DS77 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHISA9B4DS77 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHISA9B4DS77 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SHISA9B4DS77 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SHISA9B4DS77 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHISA9B4DS77 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.62■□□□□ 0.89
SHISA9B4DS77 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHISA9B4DS77 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.62■□□□□ 0.89
SHISA9B4DS77 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHISA9B4DS77 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHISA9B4DS77 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHISA9B4DS77 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.61■□□□□ 0.89
SHISA9B4DS77 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHISA9B4DS77 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHISA9B4DS77 AC022616.5-201ENST00000518796 181 ntBASIC20.61■□□□□ 0.89
SHISA9B4DS77 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SHISA9B4DS77 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.61■□□□□ 0.89
SHISA9B4DS77 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHISA9B4DS77 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.61■□□□□ 0.89
SHISA9B4DS77 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.6■□□□□ 0.89
SHISA9B4DS77 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA9B4DS77 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHISA9B4DS77 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.6■□□□□ 0.89
SHISA9B4DS77 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.6■□□□□ 0.89
SHISA9B4DS77 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.6■□□□□ 0.89
SHISA9B4DS77 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.6■□□□□ 0.89
SHISA9B4DS77 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SHISA9B4DS77 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA9B4DS77 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.59■□□□□ 0.89
SHISA9B4DS77 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA9B4DS77 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA9B4DS77 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA9B4DS77 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA9B4DS77 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA9B4DS77 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA9B4DS77 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SHISA9B4DS77 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA9B4DS77 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SHISA9B4DS77 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SHISA9B4DS77 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SHISA9B4DS77 GUSBP5-201ENST00000418136 578 ntBASIC20.58■□□□□ 0.89
SHISA9B4DS77 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA9B4DS77 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHISA9B4DS77 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHISA9B4DS77 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA9B4DS77 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA9B4DS77 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA9B4DS77 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA9B4DS77 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.57■□□□□ 0.88
SHISA9B4DS77 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms