Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 SHF-206ENST00000560471 2499 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 AC103724.3-201ENST00000564481 992 ntBASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV10A0A0B4J240 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 AC022616.5-201ENST00000518796 181 ntBASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV10A0A0B4J240 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV10A0A0B4J240 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV10A0A0B4J240 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV10A0A0B4J240 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV10A0A0B4J240 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV10A0A0B4J240 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV10A0A0B4J240 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV10A0A0B4J240 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV10A0A0B4J240 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV10A0A0B4J240 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV10A0A0B4J240 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV10A0A0B4J240 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV10A0A0B4J240 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAV10A0A0B4J240 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV10A0A0B4J240 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV10A0A0B4J240 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV10A0A0B4J240 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV10A0A0B4J240 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV10A0A0B4J240 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV10A0A0B4J240 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV10A0A0B4J240 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV10A0A0B4J240 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV10A0A0B4J240 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV10A0A0B4J240 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV10A0A0B4J240 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms