Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.71■■□□□ 1.07
TRGV5A0A0B4J1U4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
TRGV5A0A0B4J1U4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRGV5A0A0B4J1U4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRGV5A0A0B4J1U4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.7■■□□□ 1.06
TRGV5A0A0B4J1U4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV5A0A0B4J1U4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV5A0A0B4J1U4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV5A0A0B4J1U4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV5A0A0B4J1U4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV5A0A0B4J1U4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV5A0A0B4J1U4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.69■■□□□ 1.06
TRGV5A0A0B4J1U4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.68■■□□□ 1.06
TRGV5A0A0B4J1U4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV5A0A0B4J1U4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV5A0A0B4J1U4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRGV5A0A0B4J1U4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV5A0A0B4J1U4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV5A0A0B4J1U4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.67■■□□□ 1.06
TRGV5A0A0B4J1U4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRGV5A0A0B4J1U4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRGV5A0A0B4J1U4 AC103724.3-201ENST00000564481 992 ntBASIC21.67■■□□□ 1.06
TRGV5A0A0B4J1U4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 AL031848.2-201ENST00000607670 837 ntBASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV5A0A0B4J1U4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV5A0A0B4J1U4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.65■■□□□ 1.06
TRGV5A0A0B4J1U4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.65■■□□□ 1.06
TRGV5A0A0B4J1U4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV5A0A0B4J1U4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TRGV5A0A0B4J1U4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 AC009299.2-201ENST00000482477 511 ntBASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV5A0A0B4J1U4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRGV5A0A0B4J1U4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRGV5A0A0B4J1U4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.63■■□□□ 1.05
TRGV5A0A0B4J1U4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV5A0A0B4J1U4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRGV5A0A0B4J1U4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.62■■□□□ 1.05
TRGV5A0A0B4J1U4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV5A0A0B4J1U4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.62■■□□□ 1.05
TRGV5A0A0B4J1U4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV5A0A0B4J1U4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRGV5A0A0B4J1U4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV5A0A0B4J1U4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
TRGV5A0A0B4J1U4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 AC022616.5-201ENST00000518796 181 ntBASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV5A0A0B4J1U4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TRGV5A0A0B4J1U4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.59■■□□□ 1.05
TRGV5A0A0B4J1U4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRGV5A0A0B4J1U4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
TRGV5A0A0B4J1U4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRGV5A0A0B4J1U4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRGV5A0A0B4J1U4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRGV5A0A0B4J1U4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRGV5A0A0B4J1U4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRGV5A0A0B4J1U4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.57■■□□□ 1.04
TRGV5A0A0B4J1U4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
TRGV5A0A0B4J1U4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.57■■□□□ 1.04
TRGV5A0A0B4J1U4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRGV5A0A0B4J1U4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRGV5A0A0B4J1U4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRGV5A0A0B4J1U4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRGV5A0A0B4J1U4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRGV5A0A0B4J1U4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRGV5A0A0B4J1U4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.56■■□□□ 1.04
TRGV5A0A0B4J1U4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRGV5A0A0B4J1U4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TRGV5A0A0B4J1U4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms