Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 AC135983.2-203ENST00000454486 1613 ntBASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-1A0A075B6T8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-1A0A075B6T8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV9-1A0A075B6T8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV9-1A0A075B6T8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-1A0A075B6T8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV9-1A0A075B6T8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV9-1A0A075B6T8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.02■□□□□ 0.47
TRAV9-1A0A075B6T8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV9-1A0A075B6T8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV9-1A0A075B6T8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV9-1A0A075B6T8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRAV9-1A0A075B6T8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-1A0A075B6T8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV9-1A0A075B6T8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms