Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 LINC01971-201ENST00000617888 1048 ntBASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 AC142381.3-201ENST00000568208 1670 ntBASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV25-1A0A075B6N4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 AL139125.2-201ENST00000623134 1869 ntBASIC17.12■□□□□ 0.33
TRBV25-1A0A075B6N4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV25-1A0A075B6N4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV25-1A0A075B6N4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV25-1A0A075B6N4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV25-1A0A075B6N4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV25-1A0A075B6N4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV25-1A0A075B6N4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBV25-1A0A075B6N4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV25-1A0A075B6N4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV25-1A0A075B6N4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV25-1A0A075B6N4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV25-1A0A075B6N4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV25-1A0A075B6N4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV25-1A0A075B6N4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV25-1A0A075B6N4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV25-1A0A075B6N4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV25-1A0A075B6N4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV25-1A0A075B6N4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 AC008813.1-201ENST00000536597 885 ntBASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV25-1A0A075B6N4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 RPS2P35-201ENST00000443417 897 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L13-201ENST00000554103 1267 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L15-201ENST00000611059 1267 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L23-201ENST00000615195 1269 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L24-201ENST00000617576 1269 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L22-201ENST00000618238 1269 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L20-201ENST00000619712 1269 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L21-201ENST00000622058 1269 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L10-201ENST00000622460 1267 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 DUX4L25-201ENST00000624915 1269 ntBASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV25-1A0A075B6N4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV25-1A0A075B6N4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV25-1A0A075B6N4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV25-1A0A075B6N4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV25-1A0A075B6N4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms