Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 AC079328.2-201ENST00000561241 3354 ntBASIC16.75■□□□□ 0.27
MKS1Q9NXB0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 LINC00982-205ENST00000420957 435 ntBASIC16.75■□□□□ 0.27
MKS1Q9NXB0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 TERC-201ENST00000602385 541 ntBASIC16.75■□□□□ 0.27
MKS1Q9NXB0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.75■□□□□ 0.27
MKS1Q9NXB0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 AC097637.2-201ENST00000624096 1997 ntBASIC16.75■□□□□ 0.27
MKS1Q9NXB0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MKS1Q9NXB0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 CHCHD2P8-201ENST00000429873 447 ntBASIC16.74■□□□□ 0.27
MKS1Q9NXB0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 AC243591.1-201ENST00000452967 1364 ntBASIC16.74■□□□□ 0.27
MKS1Q9NXB0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MKS1Q9NXB0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 AL596257.1-201ENST00000641463 2694 ntBASIC16.73■□□□□ 0.27
MKS1Q9NXB0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms