Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 POM121L3P-201ENST00000419331 1163 ntBASIC17.36■□□□□ 0.37
CASC4Q6P4E1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 NUS1P2-201ENST00000417358 873 ntBASIC17.35■□□□□ 0.37
CASC4Q6P4E1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 AC012615.1-201ENST00000565797 1299 ntBASIC17.35■□□□□ 0.37
CASC4Q6P4E1 MIR3180-1-201ENST00000580374 94 ntBASIC17.35■□□□□ 0.37
CASC4Q6P4E1 MIR3180-3-201ENST00000584616 94 ntBASIC17.35■□□□□ 0.37
CASC4Q6P4E1 AC092329.2-201ENST00000598402 547 ntBASIC17.35■□□□□ 0.37
CASC4Q6P4E1 AC092119.3-201ENST00000612618 583 ntBASIC17.35■□□□□ 0.37
CASC4Q6P4E1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASC4Q6P4E1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 AC097637.2-201ENST00000624096 1997 ntBASIC17.34■□□□□ 0.37
CASC4Q6P4E1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms