Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AC092068.3-201ENST00000587894 2016 ntBASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 COX5BP8-201ENST00000416911 349 ntBASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 SPTLC1P1-201ENST00000447199 261 ntBASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 ZNF890P-202ENST00000530367 1156 ntBASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 KRT8P39-201ENST00000396270 1433 ntBASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPHKAPQ2M3C7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 GGT4P-201ENST00000623672 1708 ntBASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC24.02■■□□□ 1.44
SPHKAPQ2M3C7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 MEIS3P1-201ENST00000495167 958 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 SPTSSB-204ENST00000617024 1292 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 PCDHB17P-201ENST00000539533 2393 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 MTND6P24-201ENST00000440466 518 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 GAPDHP21-201ENST00000450301 1010 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 AL512361.1-201ENST00000554200 418 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 AC061975.2-201ENST00000581722 295 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 AL139011.1-202ENST00000642063 584 ntBASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPHKAPQ2M3C7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SPHKAPQ2M3C7 AL035456.1-201ENST00000456064 1369 ntBASIC24■■□□□ 1.43
SPHKAPQ2M3C7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPHKAPQ2M3C7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPHKAPQ2M3C7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
SPHKAPQ2M3C7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPHKAPQ2M3C7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPHKAPQ2M3C7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC23.99■■□□□ 1.43
SPHKAPQ2M3C7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC23.99■■□□□ 1.43
SPHKAPQ2M3C7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms