Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.99□□□□□ -0.01
CCR9P51686 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.99□□□□□ -0.01
CCR9P51686 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 VENTXP7-201ENST00000475503 772 ntBASIC14.99□□□□□ -0.01
CCR9P51686 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.99□□□□□ -0.01
CCR9P51686 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.99□□□□□ -0.01
CCR9P51686 LINC01238-205ENST00000567549 1107 ntBASIC14.99□□□□□ -0.01
CCR9P51686 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.99□□□□□ -0.01
CCR9P51686 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CCR9P51686 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.99□□□□□ -0.01
CCR9P51686 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 HLA-A-202ENST00000376806 1854 ntBASIC14.99□□□□□ -0.01
CCR9P51686 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.99□□□□□ -0.01
CCR9P51686 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCR9P51686 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.98□□□□□ -0.01
CCR9P51686 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CCR9P51686 AL662844.4-201ENST00000606367 2838 ntBASIC14.98□□□□□ -0.01
CCR9P51686 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.98□□□□□ -0.01
CCR9P51686 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 AC068418.2-201ENST00000577309 3703 ntBASIC14.98□□□□□ -0.01
CCR9P51686 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.98□□□□□ -0.01
CCR9P51686 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.98□□□□□ -0.01
CCR9P51686 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.98□□□□□ -0.01
CCR9P51686 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCR9P51686 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.98□□□□□ -0.01
CCR9P51686 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.98□□□□□ -0.01
CCR9P51686 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
CCR9P51686 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.98□□□□□ -0.01
CCR9P51686 AC066615.1-201ENST00000640911 628 ntBASIC14.98□□□□□ -0.01
CCR9P51686 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CCR9P51686 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCR9P51686 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCR9P51686 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCR9P51686 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.97□□□□□ -0.01
CCR9P51686 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCR9P51686 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCR9P51686 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.97□□□□□ -0.01
CCR9P51686 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCR9P51686 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCR9P51686 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms