Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.85□□□□□ -0.03
GDNFP39905 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GDNFP39905 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GDNFP39905 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.84□□□□□ -0.03
GDNFP39905 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.84□□□□□ -0.03
GDNFP39905 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.84□□□□□ -0.03
GDNFP39905 AC113404.2-201ENST00000507884 177 ntBASIC14.84□□□□□ -0.03
GDNFP39905 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.84□□□□□ -0.03
GDNFP39905 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.84□□□□□ -0.03
GDNFP39905 ZNF444P1-201ENST00000559497 298 ntBASIC14.84□□□□□ -0.03
GDNFP39905 AL049597.2-201ENST00000565575 961 ntBASIC14.84□□□□□ -0.03
GDNFP39905 RNF126P1-202ENST00000569893 925 ntBASIC14.84□□□□□ -0.03
GDNFP39905 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.84□□□□□ -0.03
GDNFP39905 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.84□□□□□ -0.03
GDNFP39905 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GDNFP39905 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.84□□□□□ -0.03
GDNFP39905 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDNFP39905 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
GDNFP39905 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
GDNFP39905 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.83□□□□□ -0.03
GDNFP39905 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.83□□□□□ -0.03
GDNFP39905 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GDNFP39905 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GDNFP39905 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GDNFP39905 KRT89P-201ENST00000620027 1478 ntBASIC14.83□□□□□ -0.03
GDNFP39905 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GDNFP39905 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.83□□□□□ -0.04
GDNFP39905 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GDNFP39905 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.83□□□□□ -0.04
GDNFP39905 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GDNFP39905 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.83□□□□□ -0.04
GDNFP39905 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
GDNFP39905 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.83□□□□□ -0.04
GDNFP39905 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.83□□□□□ -0.04
GDNFP39905 AP003733.1-201ENST00000491725 852 ntBASIC14.83□□□□□ -0.04
GDNFP39905 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.83□□□□□ -0.04
GDNFP39905 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.83□□□□□ -0.04
GDNFP39905 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 NTF6B-201ENST00000591913 560 ntBASIC14.83□□□□□ -0.04
GDNFP39905 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
GDNFP39905 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GDNFP39905 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
GDNFP39905 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.83□□□□□ -0.04
GDNFP39905 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.83□□□□□ -0.04
GDNFP39905 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.83□□□□□ -0.04
GDNFP39905 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.83□□□□□ -0.04
GDNFP39905 AC104640.1-201ENST00000562617 2109 ntBASIC14.83□□□□□ -0.04
GDNFP39905 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
GDNFP39905 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
GDNFP39905 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDNFP39905 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
GDNFP39905 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.82□□□□□ -0.04
GDNFP39905 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms