Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.35■□□□□ 0.69
CLCN1P35523 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
CLCN1P35523 HLA-F-220ENST00000434407 884 ntBASIC19.35■□□□□ 0.69
CLCN1P35523 AC104076.2-201ENST00000448912 469 ntBASIC19.35■□□□□ 0.69
CLCN1P35523 AC092597.1-201ENST00000487352 616 ntBASIC19.35■□□□□ 0.69
CLCN1P35523 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CLCN1P35523 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCN1P35523 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.35■□□□□ 0.69
CLCN1P35523 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.35■□□□□ 0.69
CLCN1P35523 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.35■□□□□ 0.69
CLCN1P35523 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CLCN1P35523 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLCN1P35523 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCN1P35523 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CLCN1P35523 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CLCN1P35523 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCN1P35523 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLCN1P35523 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCN1P35523 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 TSPY5P-201ENST00000426936 936 ntBASIC19.34■□□□□ 0.69
CLCN1P35523 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.34■□□□□ 0.69
CLCN1P35523 KRT18P38-201ENST00000449496 1282 ntBASIC19.34■□□□□ 0.69
CLCN1P35523 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCN1P35523 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.34■□□□□ 0.69
CLCN1P35523 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CLCN1P35523 AL136038.4-201ENST00000603606 1261 ntBASIC19.34■□□□□ 0.69
CLCN1P35523 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 AC026748.1-201ENST00000624349 3251 ntBASIC19.34■□□□□ 0.69
CLCN1P35523 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLCN1P35523 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCN1P35523 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN1P35523 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN1P35523 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLCN1P35523 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
CLCN1P35523 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN1P35523 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN1P35523 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
CLCN1P35523 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN1P35523 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN1P35523 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.33■□□□□ 0.69
CLCN1P35523 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 AC113404.2-201ENST00000507884 177 ntBASIC19.33■□□□□ 0.68
CLCN1P35523 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCN1P35523 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCN1P35523 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN1P35523 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CLCN1P35523 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN1P35523 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms