Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSDP07339 AC005332.3-201ENST00000589904 676 ntBASIC14.14□□□□□ -0.15
CTSDP07339 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSDP07339 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 LINC00554-201ENST00000564841 3011 ntBASIC14.14□□□□□ -0.15
CTSDP07339 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CTSDP07339 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTSDP07339 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSDP07339 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSDP07339 KRT18P22-201ENST00000402024 1347 ntBASIC14.14□□□□□ -0.15
CTSDP07339 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTSDP07339 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.13□□□□□ -0.15
CTSDP07339 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTSDP07339 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.13□□□□□ -0.15
CTSDP07339 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTSDP07339 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.13□□□□□ -0.15
CTSDP07339 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.13□□□□□ -0.15
CTSDP07339 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CTSDP07339 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 AL390719.2-201ENST00000606993 987 ntBASIC14.13□□□□□ -0.15
CTSDP07339 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CTSDP07339 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTSDP07339 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.13□□□□□ -0.15
CTSDP07339 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSDP07339 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
CTSDP07339 AL353593.2-201ENST00000602529 1483 ntBASIC14.12□□□□□ -0.15
CTSDP07339 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CTSDP07339 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSDP07339 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CTSDP07339 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CTSDP07339 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.12□□□□□ -0.15
CTSDP07339 FAM220CP-201ENST00000395253 831 ntBASIC14.12□□□□□ -0.15
CTSDP07339 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSDP07339 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSDP07339 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CTSDP07339 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSDP07339 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms