Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DRAP01903 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DRAP01903 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DRAP01903 AC129492.6-201ENST00000611383 1305 ntBASIC18.23■□□□□ 0.51
HLA-DRAP01903 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 AC011676.5-201ENST00000624864 2660 ntBASIC18.23■□□□□ 0.51
HLA-DRAP01903 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.23■□□□□ 0.51
HLA-DRAP01903 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 AGGF1P2-201ENST00000426656 2106 ntBASIC18.23■□□□□ 0.51
HLA-DRAP01903 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
HLA-DRAP01903 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRAP01903 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 IGLL3P-201ENST00000412472 434 ntBASIC18.22■□□□□ 0.51
HLA-DRAP01903 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRAP01903 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.22■□□□□ 0.51
HLA-DRAP01903 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.21■□□□□ 0.51
HLA-DRAP01903 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DRAP01903 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DRAP01903 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
HLA-DRAP01903 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DRAP01903 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DRAP01903 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DRAP01903 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DRAP01903 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DRAP01903 LINC00895-201ENST00000629028 1637 ntBASIC18.21■□□□□ 0.51
HLA-DRAP01903 AL391256.1-201ENST00000443260 1855 ntBASIC18.21■□□□□ 0.51
HLA-DRAP01903 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DRAP01903 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DRAP01903 CRYGEP-201ENST00000412192 528 ntBASIC18.21■□□□□ 0.51
HLA-DRAP01903 PMS2P1-201ENST00000431037 1228 ntBASIC18.21■□□□□ 0.51
HLA-DRAP01903 HCG4B-203ENST00000450128 991 ntBASIC18.21■□□□□ 0.51
HLA-DRAP01903 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.21■□□□□ 0.51
HLA-DRAP01903 AP002490.2-201ENST00000524791 560 ntBASIC18.21■□□□□ 0.51
HLA-DRAP01903 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.21■□□□□ 0.51
HLA-DRAP01903 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HLA-DRAP01903 MPDU1-223ENST00000582151 728 ntBASIC18.21■□□□□ 0.51
HLA-DRAP01903 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms