Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.18■□□□□ 0.82
MBD4O95243 AC211476.1-201ENST00000503899 468 ntBASIC20.18■□□□□ 0.82
MBD4O95243 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD4O95243 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.18■□□□□ 0.82
MBD4O95243 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.18■□□□□ 0.82
MBD4O95243 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.18■□□□□ 0.82
MBD4O95243 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD4O95243 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD4O95243 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
MBD4O95243 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD4O95243 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.18■□□□□ 0.82
MBD4O95243 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.17■□□□□ 0.82
MBD4O95243 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.17■□□□□ 0.82
MBD4O95243 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
MBD4O95243 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.17■□□□□ 0.82
MBD4O95243 RPS8P6-201ENST00000426177 609 ntBASIC20.17■□□□□ 0.82
MBD4O95243 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.17■□□□□ 0.82
MBD4O95243 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.17■□□□□ 0.82
MBD4O95243 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.17■□□□□ 0.82
MBD4O95243 CEND1P1-201ENST00000451006 455 ntBASIC20.17■□□□□ 0.82
MBD4O95243 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.17■□□□□ 0.82
MBD4O95243 CYP2A7P1-201ENST00000595391 815 ntBASIC20.17■□□□□ 0.82
MBD4O95243 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.17■□□□□ 0.82
MBD4O95243 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MBD4O95243 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD4O95243 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MBD4O95243 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MBD4O95243 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.16■□□□□ 0.82
MBD4O95243 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.16■□□□□ 0.82
MBD4O95243 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.16■□□□□ 0.82
MBD4O95243 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
MBD4O95243 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD4O95243 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.16■□□□□ 0.82
MBD4O95243 AC099522.2-201ENST00000607001 744 ntBASIC20.16■□□□□ 0.82
MBD4O95243 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.16■□□□□ 0.82
MBD4O95243 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD4O95243 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
MBD4O95243 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.16■□□□□ 0.82
MBD4O95243 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD4O95243 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD4O95243 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MBD4O95243 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.15■□□□□ 0.82
MBD4O95243 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.15■□□□□ 0.82
MBD4O95243 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
MBD4O95243 AC112191.1-201ENST00000523689 701 ntBASIC20.15■□□□□ 0.82
MBD4O95243 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.15■□□□□ 0.82
MBD4O95243 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms