Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH7O60245 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDH7O60245 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH7O60245 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH7O60245 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDH7O60245 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH7O60245 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH7O60245 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH7O60245 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH7O60245 SART3-203ENST00000546611 1184 ntBASIC16.23■□□□□ 0.19
PCDH7O60245 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH7O60245 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH7O60245 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDH7O60245 LINC01711-201ENST00000598340 967 ntBASIC16.23■□□□□ 0.19
PCDH7O60245 AL139424.1-201ENST00000607572 797 ntBASIC16.23■□□□□ 0.19
PCDH7O60245 AC092171.3-201ENST00000610122 2651 ntBASIC16.23■□□□□ 0.19
PCDH7O60245 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDH7O60245 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PCDH7O60245 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDH7O60245 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH7O60245 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDH7O60245 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDH7O60245 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDH7O60245 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDH7O60245 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 SCARNA2-201ENST00000458748 420 ntBASIC16.22■□□□□ 0.19
PCDH7O60245 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 MTDHP4-201ENST00000600287 670 ntBASIC16.22■□□□□ 0.19
PCDH7O60245 TERC-201ENST00000602385 541 ntBASIC16.22■□□□□ 0.19
PCDH7O60245 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH7O60245 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDH7O60245 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDH7O60245 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDH7O60245 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 AL645728.1-201ENST00000366221 2101 ntBASIC16.22■□□□□ 0.19
PCDH7O60245 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH7O60245 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
PCDH7O60245 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH7O60245 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH7O60245 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH7O60245 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
PCDH7O60245 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 AC018695.7-201ENST00000624587 2492 ntBASIC16.21■□□□□ 0.19
PCDH7O60245 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
PCDH7O60245 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 AKR1C7P-201ENST00000305623 895 ntBASIC16.21■□□□□ 0.19
PCDH7O60245 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 SAPCD2P3-201ENST00000455031 850 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms