Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MIR5100-201ENST00000579544 119 ntBASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 TOP3BP1-201ENST00000420768 1380 ntBASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 AL512652.2-201ENST00000625156 1716 ntBASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 AL671710.1-201ENST00000610245 2349 ntBASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 PCED1CP-201ENST00000419887 785 ntBASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 NPAP1P7-201ENST00000613027 823 ntBASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-3A0A0A0MS03 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 AL596087.1-201ENST00000400979 1969 ntBASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 AP005117.1-201ENST00000584346 1413 ntBASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 AC012615.1-201ENST00000565797 1299 ntBASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 MIR4492-201ENST00000581627 80 ntBASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 AC132872.4-202ENST00000622924 2756 ntBASIC15.87■□□□□ 0.13
TRBV5-3A0A0A0MS03 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms