Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 AP000525.1-201ENST00000608286 694 ntBASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 AC004263.2-201ENST00000617183 678 ntBASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 AC097374.2-201ENST00000618617 1306 ntBASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 HYMAI-201ENST00000635591 3347 ntBASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KCNIP3Q9Y2W7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 AC007950.2-201ENST00000615045 2347 ntBASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 LINC00554-201ENST00000564841 3011 ntBASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
KCNIP3Q9Y2W7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 MIR1238-201ENST00000408483 83 ntBASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCNIP3Q9Y2W7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 EGFEM1P-202ENST00000431685 1563 ntBASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms