Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGC3Q9UN70 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC3Q9UN70 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC3Q9UN70 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC3Q9UN70 SLC22A20-204ENST00000530038 1673 ntBASIC17.9■□□□□ 0.46
PCDHGC3Q9UN70 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC3Q9UN70 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC3Q9UN70 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
PCDHGC3Q9UN70 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGC3Q9UN70 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGC3Q9UN70 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PCDHGC3Q9UN70 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 HLA-J-202ENST00000469281 1241 ntBASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 AC005412.3-201ENST00000580309 715 ntBASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC3Q9UN70 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 HLA-A-202ENST00000376806 1854 ntBASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 PMS2P1-201ENST00000431037 1228 ntBASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 RNA5SP415-201ENST00000517246 115 ntBASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 AC131009.4-201ENST00000624048 1740 ntBASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 SNX33P1-201ENST00000592116 1762 ntBASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC3Q9UN70 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms