Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA3CQ99985 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA3CQ99985 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.24■□□□□ 0.35
SEMA3CQ99985 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA3CQ99985 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA3CQ99985 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA3CQ99985 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA3CQ99985 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA3CQ99985 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 TUBB8P12-201ENST00000308911 1335 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 TUBB7P-202ENST00000428444 1305 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 TUBB8P7-204ENST00000567960 1332 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 MRPL20P1-201ENST00000400819 433 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 AC009947.1-201ENST00000444350 727 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 AC092183.1-201ENST00000469884 875 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 KRT18P58-201ENST00000527480 1120 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 PCDHB17P-201ENST00000539533 2393 ntBASIC17.23■□□□□ 0.35
SEMA3CQ99985 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA3CQ99985 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA3CQ99985 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 MIR4751-201ENST00000578027 74 ntBASIC17.22■□□□□ 0.35
SEMA3CQ99985 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SEMA3CQ99985 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEMA3CQ99985 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms