Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KDM1BQ8NB78 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.33■□□□□ 0.37
KDM1BQ8NB78 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KDM1BQ8NB78 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.33■□□□□ 0.37
KDM1BQ8NB78 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.33■□□□□ 0.37
KDM1BQ8NB78 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.33■□□□□ 0.37
KDM1BQ8NB78 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 AC211486.1-202ENST00000416371 468 ntBASIC17.33■□□□□ 0.36
KDM1BQ8NB78 HTR5BP-201ENST00000430851 1154 ntBASIC17.33■□□□□ 0.36
KDM1BQ8NB78 AC092183.1-201ENST00000469884 875 ntBASIC17.33■□□□□ 0.36
KDM1BQ8NB78 AC211476.1-201ENST00000503899 468 ntBASIC17.33■□□□□ 0.36
KDM1BQ8NB78 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 AP001160.2-201ENST00000596071 487 ntBASIC17.33■□□□□ 0.36
KDM1BQ8NB78 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.33■□□□□ 0.36
KDM1BQ8NB78 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 AC134684.3-201ENST00000641758 218 ntBASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KDM1BQ8NB78 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.31■□□□□ 0.36
KDM1BQ8NB78 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 AC107918.2-201ENST00000530817 355 ntBASIC17.31■□□□□ 0.36
KDM1BQ8NB78 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 AL645728.2-201ENST00000641974 660 ntBASIC17.31■□□□□ 0.36
KDM1BQ8NB78 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 EGFEM1P-202ENST00000431685 1563 ntBASIC17.31■□□□□ 0.36
KDM1BQ8NB78 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 TNRC18P3-201ENST00000441896 2691 ntBASIC17.31■□□□□ 0.36
KDM1BQ8NB78 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM1BQ8NB78 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.3■□□□□ 0.36
KDM1BQ8NB78 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDM1BQ8NB78 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDM1BQ8NB78 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms