Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 AP002414.1-201ENST00000391405 1147 ntBASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 MIR1224-201ENST00000408193 85 ntBASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 AC064862.7-201ENST00000604520 867 ntBASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 CROCCP1-201ENST00000426910 5675 ntBASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCDC83Q8IWF9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 AL353135.1-201ENST00000606729 504 ntBASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 AL590787.1-201ENST00000568856 1315 ntBASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CCDC83Q8IWF9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 AC243591.1-201ENST00000452967 1364 ntBASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 AC092364.2-201ENST00000596710 2692 ntBASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 UPK3BP1-201ENST00000428678 509 ntBASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 NKAPP1-205ENST00000585790 367 ntBASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 AC006449.5-201ENST00000610658 2098 ntBASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms