Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAPH1Q70E73 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAPH1Q70E73 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.15■□□□□ 0.34
RAPH1Q70E73 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
RAPH1Q70E73 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAPH1Q70E73 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAPH1Q70E73 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 AC003669.1-201ENST00000334569 611 ntBASIC17.14■□□□□ 0.33
RAPH1Q70E73 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 NTF6B-201ENST00000591913 560 ntBASIC17.14■□□□□ 0.33
RAPH1Q70E73 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAPH1Q70E73 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RAPH1Q70E73 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.13■□□□□ 0.33
RAPH1Q70E73 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 AC091607.1-201ENST00000490318 1060 ntBASIC17.13■□□□□ 0.33
RAPH1Q70E73 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 AC078925.2-201ENST00000624013 1973 ntBASIC17.13■□□□□ 0.33
RAPH1Q70E73 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAPH1Q70E73 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.13■□□□□ 0.33
RAPH1Q70E73 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAPH1Q70E73 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAPH1Q70E73 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAPH1Q70E73 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAPH1Q70E73 AL031133.1-201ENST00000406807 723 ntBASIC17.12■□□□□ 0.33
RAPH1Q70E73 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.12■□□□□ 0.33
RAPH1Q70E73 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 AL121956.5-201ENST00000625261 221 ntBASIC17.12■□□□□ 0.33
RAPH1Q70E73 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAPH1Q70E73 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms