Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.71■□□□□ 0.11
PRKCDQ05655 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.71■□□□□ 0.11
PRKCDQ05655 CHCHD2P8-201ENST00000429873 447 ntBASIC15.71■□□□□ 0.11
PRKCDQ05655 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.71■□□□□ 0.11
PRKCDQ05655 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.71■□□□□ 0.11
PRKCDQ05655 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.71■□□□□ 0.11
PRKCDQ05655 AC011467.2-201ENST00000598425 242 ntBASIC15.71■□□□□ 0.11
PRKCDQ05655 AL121672.3-201ENST00000608644 468 ntBASIC15.71■□□□□ 0.11
PRKCDQ05655 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.71■□□□□ 0.11
PRKCDQ05655 AD001527.2-201ENST00000622994 785 ntBASIC15.71■□□□□ 0.11
PRKCDQ05655 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PRKCDQ05655 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.71■□□□□ 0.11
PRKCDQ05655 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRKCDQ05655 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.71■□□□□ 0.1
PRKCDQ05655 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCDQ05655 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCDQ05655 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
PRKCDQ05655 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCDQ05655 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PRKCDQ05655 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCDQ05655 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCDQ05655 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PRKCDQ05655 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 AC003669.1-201ENST00000334569 611 ntBASIC15.7■□□□□ 0.1
PRKCDQ05655 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 AL031133.1-201ENST00000406807 723 ntBASIC15.7■□□□□ 0.1
PRKCDQ05655 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.7■□□□□ 0.1
PRKCDQ05655 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 BX276092.5-203ENST00000456199 560 ntBASIC15.7■□□□□ 0.1
PRKCDQ05655 AC091607.1-201ENST00000490318 1060 ntBASIC15.7■□□□□ 0.1
PRKCDQ05655 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.7■□□□□ 0.1
PRKCDQ05655 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.7■□□□□ 0.1
PRKCDQ05655 AL121956.5-201ENST00000625261 221 ntBASIC15.7■□□□□ 0.1
PRKCDQ05655 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.7■□□□□ 0.1
PRKCDQ05655 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRKCDQ05655 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCDQ05655 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCDQ05655 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCDQ05655 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCDQ05655 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.69■□□□□ 0.1
PRKCDQ05655 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
PRKCDQ05655 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCDQ05655 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.69■□□□□ 0.1
PRKCDQ05655 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PRKCDQ05655 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCDQ05655 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCDQ05655 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCDQ05655 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCDQ05655 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRKCDQ05655 AC132938.5-201ENST00000624980 1813 ntBASIC15.69■□□□□ 0.1
PRKCDQ05655 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.69■□□□□ 0.1
PRKCDQ05655 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms