Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LIMK2P53671 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
LIMK2P53671 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LIMK2P53671 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LIMK2P53671 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
LIMK2P53671 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LIMK2P53671 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LIMK2P53671 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.16■□□□□ 0.34
LIMK2P53671 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.16■□□□□ 0.34
LIMK2P53671 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.16■□□□□ 0.34
LIMK2P53671 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.16■□□□□ 0.34
LIMK2P53671 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
LIMK2P53671 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 GPALPP1-207ENST00000611650 899 ntBASIC17.16■□□□□ 0.34
LIMK2P53671 AC117500.6-201ENST00000624871 588 ntBASIC17.16■□□□□ 0.34
LIMK2P53671 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.16■□□□□ 0.34
LIMK2P53671 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.16■□□□□ 0.34
LIMK2P53671 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.16■□□□□ 0.34
LIMK2P53671 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.16■□□□□ 0.34
LIMK2P53671 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LIMK2P53671 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIMK2P53671 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 AC092171.3-201ENST00000610122 2651 ntBASIC17.15■□□□□ 0.34
LIMK2P53671 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
LIMK2P53671 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LIMK2P53671 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LIMK2P53671 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LIMK2P53671 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.15■□□□□ 0.34
LIMK2P53671 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.15■□□□□ 0.34
LIMK2P53671 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 SART3-203ENST00000546611 1184 ntBASIC17.15■□□□□ 0.34
LIMK2P53671 AC021087.4-201ENST00000563761 564 ntBASIC17.15■□□□□ 0.34
LIMK2P53671 AC106730.1-201ENST00000566722 1090 ntBASIC17.15■□□□□ 0.34
LIMK2P53671 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
LIMK2P53671 AC006538.3-201ENST00000612495 578 ntBASIC17.15■□□□□ 0.34
LIMK2P53671 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LIMK2P53671 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LIMK2P53671 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.15■□□□□ 0.34
LIMK2P53671 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LIMK2P53671 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
LIMK2P53671 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LIMK2P53671 AL356309.3-201ENST00000624132 1934 ntBASIC17.15■□□□□ 0.34
LIMK2P53671 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.15■□□□□ 0.34
LIMK2P53671 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
LIMK2P53671 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
LIMK2P53671 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIMK2P53671 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.14■□□□□ 0.34
LIMK2P53671 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
LIMK2P53671 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LIMK2P53671 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LIMK2P53671 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LIMK2P53671 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.14■□□□□ 0.33
LIMK2P53671 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.14■□□□□ 0.33
LIMK2P53671 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LIMK2P53671 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.14■□□□□ 0.33
LIMK2P53671 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.14■□□□□ 0.33
LIMK2P53671 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms