Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A6P48664 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A6P48664 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 AC105917.1-201ENST00000506637 2539 ntBASIC16.76■□□□□ 0.27
SLC1A6P48664 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC1A6P48664 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SLC1A6P48664 AL596257.1-201ENST00000641463 2694 ntBASIC16.76■□□□□ 0.27
SLC1A6P48664 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 AL365203.3-201ENST00000609742 2057 ntBASIC16.76■□□□□ 0.27
SLC1A6P48664 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC1A6P48664 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A6P48664 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A6P48664 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A6P48664 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC1A6P48664 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC1A6P48664 AC132938.5-201ENST00000624980 1813 ntBASIC16.75■□□□□ 0.27
SLC1A6P48664 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A6P48664 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A6P48664 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A6P48664 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A6P48664 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 AC003669.1-201ENST00000334569 611 ntBASIC16.75■□□□□ 0.27
SLC1A6P48664 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 AL137013.1-201ENST00000432946 1228 ntBASIC16.75■□□□□ 0.27
SLC1A6P48664 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC1A6P48664 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A6P48664 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.75■□□□□ 0.27
SLC1A6P48664 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A6P48664 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A6P48664 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A6P48664 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A6P48664 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A6P48664 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC1A6P48664 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC1A6P48664 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
SLC1A6P48664 AL845331.1-201ENST00000424978 1190 ntBASIC16.74■□□□□ 0.27
SLC1A6P48664 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC1A6P48664 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.74■□□□□ 0.27
SLC1A6P48664 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A6P48664 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 AL592071.1-201ENST00000611956 408 ntBASIC16.74■□□□□ 0.27
SLC1A6P48664 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC1A6P48664 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 ME2P1-201ENST00000426028 1970 ntBASIC16.74■□□□□ 0.27
SLC1A6P48664 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A6P48664 LINC00554-201ENST00000564841 3011 ntBASIC16.74■□□□□ 0.27
SLC1A6P48664 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A6P48664 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC1A6P48664 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A6P48664 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A6P48664 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A6P48664 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC1A6P48664 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A6P48664 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC1A6P48664 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A6P48664 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms